Crystal structure of the AtWRKY1 domain
Xu, Y.P., Xu, H., Wang, B., Su, X.D.To be published.
Experimental Data Snapshot
Starting Model: experimental
View more details
wwPDB Validation   3D Report Full Report
Entity ID: 3 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
WRKY transcription factor 1 | C [auth B] | 80 | Arabidopsis thaliana | Mutation(s): 0  Gene Names: WRKY1, ZAP1, At2g04880, F1O13.1, F28I8.34 | |
UniProt | |||||
Find proteins for Q9SI37 (Arabidopsis thaliana) Explore Q9SI37  Go to UniProtKB:  Q9SI37 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q9SI37 | ||||
Sequence AnnotationsExpand | |||||
|
Find similar nucleic acids by: Sequence | 3D Structure
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Length | Organism | Image | |
DNA (5'-D(*AP*GP*CP*CP*TP*TP*TP*GP*AP*CP*CP*AP*GP*CP*G)-3') | A [auth C] | 15 | Arabidopsis thaliana | ||
Sequence AnnotationsExpand | |||||
|
Find similar nucleic acids by: Sequence | 3D Structure
Entity ID: 2 | |||||
---|---|---|---|---|---|
Molecule | Chains | Length | Organism | Image | |
DNA (5'-D(*TP*CP*GP*CP*TP*GP*GP*TP*CP*AP*AP*AP*GP*GP*C)-3') | B [auth D] | 15 | Arabidopsis thaliana | ||
Sequence AnnotationsExpand | |||||
|
Ligands 1 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
ZN Query on ZN | D [auth B] | ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 99 | α = 90 |
b = 99 | β = 90 |
c = 114.333 | γ = 120 |
Software Name | Purpose |
---|---|
PHENIX | refinement |
HKL-2000 | data reduction |
HKL-2000 | data scaling |
PHASER | phasing |
PHENIX | model building |
Funding Organization | Location | Grant Number |
---|---|---|
National Natural Science Foundation of China | China | 31670740 |