The Role of Phosphate Binding in Purine Nucleoside Phosphorylase of Helicobacter pylori
Bosnjakovic, M., Lescic Asler, I., Stefanic, Z.(2018) Croat Chem Acta 91
- DOI: https://doi.org/10.5562/cca3335
Experimental Data Snapshot
Starting Model: experimental
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(2018) Croat Chem Acta 91
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Purine nucleoside phosphorylase DeoD-type | 233 | Helicobacter pylori 26695 | Mutation(s): 0  Gene Names: deoD, HP_1178 EC: 2.4.2.1 | ||
UniProt | |||||
Find proteins for P56463 (Helicobacter pylori (strain ATCC 700392 / 26695)) Explore P56463  Go to UniProtKB:  P56463 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P56463 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 2 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
PO4 Query on PO4 | DA [auth E] IA [auth F] J [auth A] P [auth B] U [auth C] | PHOSPHATE ION O4 P NBIIXXVUZAFLBC-UHFFFAOYSA-K | |||
IMD Query on IMD | AA [auth E] BA [auth E] CA [auth E] EA [auth F] FA [auth F] | IMIDAZOLE C3 H5 N2 RAXXELZNTBOGNW-UHFFFAOYSA-O |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 93.32 | α = 90 |
b = 91.49 | β = 119.9 |
c = 93.41 | γ = 90 |
Software Name | Purpose |
---|---|
PHENIX | refinement |
SCALA | data scaling |
PDB_EXTRACT | data extraction |
MOSFLM | data reduction |
MOLREP | phasing |
Funding Organization | Location | Grant Number |
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Croatia | 7423 |