6FF1 | pdb_00006ff1

CsoZ metallochaperone

PDB DOI: https://doi.org/10.2210/pdb6FF1/pdb

Classification: CHAPERONE
Organism(s): Staphylococcus aureus subsp. aureus NCTC 8325
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2018-01-03 Released: 2019-01-30
Deposition Author(s): Pelicioli-Riboldi, G., Basle, A., Waldron, K.
Funding Organization(s): Sir Henry Dale Welcome and the Royal Society, CAPES Science without borders scholarship

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.30 Å
R-Value Free:
0.172 (Depositor), 0.189 (DCC)
R-Value Work:
0.142 (Depositor)
R-Value Observed:
0.144 (Depositor)

wwPDB Validation 3D Report Full Report

Validation slider image for 6FF1

This is version 1.1 of the entry. See complete history.

Literature

The copper homeostasis system of Staphylococcus aureus: Two putative metallochaperones with contrasting copper binding properties.

Pelicioli-Riboldi, G., Tarrant, E., Basle, A., Davies, O., Waldron, K.

To be published.

Macromolecule Content

Total Structure Weight: 7.89 kDa
Atom Count: 685
Modeled Residue Count: 69
Deposited Residue Count: 69
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
CsoZ	A	69	Staphylococcus aureus subsp. aureus NCTC 8325	Mutation(s): 0 Gene Names: SAOUHSC_02321
UniProt
Find proteins for Q2FWH0 (Staphylococcus aureus (strain NCTC 8325 / PS 47)) Explore Q2FWH0 Go to UniProtKB: Q2FWH0
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q2FWH0
Sequence Annotations Expand
Reference Sequence

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
CA Query on CA Download:Ideal Coordinates CCD File SDF format, chain B [auth A] MOL2 format, chain B [auth A] mmCIF format, chain B [auth A]	B [auth A]	CALCIUM ION Ca BHPQYMZQTOCNFJ-UHFFFAOYSA-N		Interactions Focus chain B [auth A] Interactions & Density Focus chain B [auth A]

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 1.30 Å
R-Value Free: 0.172 (Depositor), 0.189 (DCC)
R-Value Work: 0.142 (Depositor)
R-Value Observed: 0.144 (Depositor)

Space Group: P 3₁ 2 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 51.048	α = 90
b = 51.048	β = 90
c = 64.955	γ = 120

Software Package:

Software Name	Purpose
GDA	data collection
XDS	data reduction
Aimless	data scaling
SHELXCD	phasing
BUCCANEER	model building
ARP/wARP	model building
REFMAC	refinement
Coot	model building
MolProbity	model building

Structure Validation

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View more in-depth experimental data

Entry History

& Funding Information

Deposition Data

Released Date: 2019-01-30

Deposition Author(s):

Pelicioli-Riboldi, G.

Funding Organization	Location	Grant Number
Sir Henry Dale Welcome and the Royal Society	United Kingdom	098375/Z/12/Z
CAPES Science without borders scholarship	Brazil	BEX 2445/13-1

Revision History (Full details and data files)

Version 1.0: 2019-01-30
Type: Initial release
Version 1.1: 2024-05-08
Changes: Data collection, Database references, Derived calculations

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.