Effects of HLA single chain trimer design on peptide presentation and stability
Finton, K.A.K.To be published.
Experimental Data Snapshot
Starting Model: experimental
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wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Beta-2-microglobulin--HLA-A*0201--HPV.16 E7 peptide LLMGTLGIV chimera | 446 | Homo sapiens | Mutation(s): 0  Gene Names: B2M, CDABP0092, HDCMA22P, HLA-A, HLAA | ||
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P03129 (Human papillomavirus type 16) Explore P03129  Go to UniProtKB:  P03129 | |||||
Find proteins for P04439 (Homo sapiens) Explore P04439  Go to UniProtKB:  P04439 | |||||
PHAROS:  P04439 GTEx:  ENSG00000206503  | |||||
Find proteins for P61769 (Homo sapiens) Explore P61769  Go to UniProtKB:  P61769 | |||||
PHAROS:  P61769 GTEx:  ENSG00000166710  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Groups | P03129P04439P61769 | ||||
Sequence AnnotationsExpand | |||||
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Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 50.363 | α = 90 |
b = 65.094 | β = 96.25 |
c = 130.321 | γ = 90 |
Software Name | Purpose |
---|---|
REFMAC | refinement |
d*TREK | data reduction |
d*TREK | data scaling |
PHASER | phasing |