5ZKV | pdb_00005zkv

Solution structure of molten globule state of L94G mutant of horse cytochrome-c

PDB DOI: https://doi.org/10.2210/pdb5ZKV/pdb

Classification: ELECTRON TRANSPORT
Organism(s): Equus caballus
Expression System: Escherichia coli BL21(DE3)
Mutation(s): Yes

Deposited: 2018-03-26 Released: 2019-05-22
Deposition Author(s): Naiyer, A., Islam, A., Hassan, M.I., Sundd, M., Ahmad, F.

Experimental Data Snapshot

Method: SOLUTION NMR
Conformers Calculated: 2000
Conformers Submitted: 15
Selection Criteria: structures with the lowest energy

wwPDB Validation 3D Report Full Report

Validation slider image for 5ZKV

This is version 1.3 of the entry. See complete history.

Literature

Solution structure of molten globule state of L94G mutant of horse cytochrome-c

Naiyer, A., Islam, A., Hassan, M.I., Sundd, M., Ahmad, F.

To be published.

Macromolecule Content

Total Structure Weight: 12.29 kDa
Atom Count: 862
Modeled Residue Count: 104
Deposited Residue Count: 104
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Cytochrome c	A	104	Equus caballus	Mutation(s): 1 Gene Names: CYCS, CYC
UniProt
Find proteins for P00004 (Equus caballus) Explore P00004 Go to UniProtKB: P00004
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	P00004
Sequence Annotations Expand
Reference Sequence

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
HEC Query on HEC Download:Ideal Coordinates CCD File SDF format, chain B [auth A] MOL2 format, chain B [auth A] mmCIF format, chain B [auth A]	B [auth A]	HEME C C₃₄ H₃₄ Fe N₄ O₄ HXQIYSLZKNYNMH-LJNAALQVSA-N		Interactions Focus chain B [auth A]

Experimental Data & Validation

Experimental Data

Method: SOLUTION NMR
Conformers Calculated: 2000
Conformers Submitted: 15
Selection Criteria: structures with the lowest energy

Structure Validation

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Entry History

Deposition Data

Released Date: 2019-05-22

Deposition Author(s):

Revision History (Full details and data files)

Version 1.0: 2019-05-22
Type: Initial release
Version 1.1: 2020-11-25
Changes: Data collection, Database references
Version 1.2: 2023-06-14
Changes: Database references, Other
Version 1.3: 2024-10-30
Changes: Data collection, Database references, Structure summary

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.