Crystal structure of tetrameric Nucleoside diphosphate kinase at 1.98 A resolution from Acinetobacter baumannii
Bairagya, H.R., Sikarwar, J., Iqbal, N., Singh, P.K., Kaur, P., Sharma, S., Singh, T.P.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Nucleoside diphosphate kinase | 143 | Acinetobacter baumannii ATCC 19606 = CIP 70.34 = JCM 6841 | Mutation(s): 0  Gene Names: ndk, F911_03401, HMPREF0010_01731 EC: 2.7.4.6 | ![]() | |
UniProt | |||||
Find proteins for D0CAF1 (Acinetobacter baumannii (strain ATCC 19606 / DSM 30007 / JCM 6841 / CCUG 19606 / CIP 70.34 / NBRC 109757 / NCIMB 12457 / NCTC 12156 / 81)) Explore D0CAF1  Go to UniProtKB:  D0CAF1 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | D0CAF1 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 1 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
MG Query on MG | E [auth A], F [auth A], G [auth A], H [auth C], I [auth D] | MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
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a = 145.88 | α = 90 |
b = 70.47 | β = 109.4 |
c = 68.85 | γ = 90 |
Software Name | Purpose |
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REFMAC | refinement |
HKL-2000 | data reduction |
SCALEPACK | data scaling |
MOLREP | phasing |