An H3-clade neutralizing antibody screened from an H7N9 patient that binds group 2 influenza A hemagglutinins
Xiao, H., Qi, J., Gao, F.G.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Hemagglutinin | A, C [auth B], E [auth C] | 327 | Influenza A virus (A/duck/Czechoslovakia/1956(H4N6)) | Mutation(s): 0  Gene Names: HA | |
UniProt | |||||
Find proteins for A3KF09 (Influenza A virus (strain A/Duck/Czechoslovakia/1956 H4N6)) Explore A3KF09  Go to UniProtKB:  A3KF09 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | A3KF09 | ||||
Glycosylation | |||||
Glycosylation Sites: 2 | |||||
Sequence AnnotationsExpand | |||||
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Entity ID: 2 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Hemagglutinin | B [auth D], D [auth E], F | 176 | Influenza A virus (A/duck/Czechoslovakia/1956(H4N6)) | Mutation(s): 0  Gene Names: HA | |
UniProt | |||||
Find proteins for A3KF09 (Influenza A virus (strain A/Duck/Czechoslovakia/1956 H4N6)) Explore A3KF09  Go to UniProtKB:  A3KF09 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | A3KF09 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 3 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
a group 2 HA binding antibody AF4H1K1 Fab heavy chain | G [auth I], I [auth K] | 233 | Homo sapiens | Mutation(s): 0  | |
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 4 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
a group 2 HA binding antibody AF4H1K1 Fab light chain | H [auth J], J [auth L] | 220 | Homo sapiens | Mutation(s): 0  | |
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
Sequence AnnotationsExpand | |||||
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Ligands 1 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
NAG Query on NAG | K [auth A] L [auth A] M [auth B] N [auth B] O [auth C] | 2-acetamido-2-deoxy-beta-D-glucopyranose C8 H15 N O6 OVRNDRQMDRJTHS-FMDGEEDCSA-N |
Length ( Å ) | Angle ( ˚ ) |
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a = 114.175 | α = 90 |
b = 140.94 | β = 95.31 |
c = 138.1 | γ = 90 |
Software Name | Purpose |
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PHENIX | refinement |
HKL-2000 | data reduction |
HKL-2000 | data scaling |
PHASER | phasing |