5XMO

X-ray crystal structure of Pseudoazurin Met16Phe/Thr36Lys variant


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.19 Å
  • R-Value Free: 0.161 
  • R-Value Work: 0.128 
  • R-Value Observed: 0.130 

Starting Model: experimental
View more details

wwPDB Validation   3D Report Full Report


This is version 1.2 of the entry. See complete history


Literature

X-ray Crystallographic Analysis of M16F/T36K Double Mutant of Pseudoazurin

Yamaguchi, T.Takebayashi, N.Akao, K.Sakai, C.Kohzuma, T.

(2017) Photon Factory Activity Report 34


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Pseudoazurin124Achromobacter cycloclastesMutation(s): 2 
Gene Names: bcp
UniProt
Find proteins for P19567 (Achromobacter cycloclastes)
Explore P19567 
Go to UniProtKB:  P19567
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP19567
Sequence Annotations
Expand
  • Reference Sequence
Small Molecules
Ligands 1 Unique
IDChains Name / Formula / InChI Key2D Diagram3D Interactions
CU
Query on CU

Download Ideal Coordinates CCD File 
B [auth A]COPPER (II) ION
Cu
JPVYNHNXODAKFH-UHFFFAOYSA-N
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.19 Å
  • R-Value Free: 0.161 
  • R-Value Work: 0.128 
  • R-Value Observed: 0.130 
  • Space Group: C 1 2 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 93.17α = 90
b = 41.16β = 98.71
c = 34.83γ = 90
Software Package:
Software NamePurpose
REFMACrefinement
SCALAdata scaling
iMOSFLMdata processing
PDB_EXTRACTdata extraction
MOLREPphasing

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Japan Society for the Promotion of ScienceJapan22550145

Revision History  (Full details and data files)

  • Version 1.0: 2018-05-16
    Type: Initial release
  • Version 1.1: 2018-11-21
    Changes: Data collection, Database references
  • Version 1.2: 2023-11-22
    Changes: Data collection, Database references, Refinement description