5WUY | pdb_00005wuy

Crystal structure of chorismate synthase from Acinetobacter baumannii at 2.50A resolution

PDB DOI: https://doi.org/10.2210/pdb5WUY/pdb

Classification: LYASE
Organism(s): Acinetobacter baumannii
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2016-12-21 Released: 2017-01-18
Deposition Author(s): Iqbal, N., Chaudhary, A., Shukla, K.P., Kaur, P., Sharma, S., Singh, T.P.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.50 Å
R-Value Free:
0.253 (Depositor), 0.253 (DCC)
R-Value Work:
0.213 (Depositor), 0.214 (DCC)
R-Value Observed:
0.215 (Depositor)

Starting Model: experimental
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This is version 1.2 of the entry. See complete history.

Literature

Crystal structure of chorismate synthase from Acinetobacter baumannii at 2.50A resolution

Iqbal, N., Chaudhary, A., Shukla, K.P., Kaur, P., Sharma, S., Singh, T.P.

To be published.

Macromolecule Content

Total Structure Weight: 78.1 kDa
Atom Count: 4,357
Modeled Residue Count: 558
Deposited Residue Count: 726
Unique protein chains: 1

Macromolecules

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Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Chorismate synthase	A, B	363	Acinetobacter baumannii	Mutation(s): 0 Gene Names: aroC EC: 4.2.3.5
UniProt
Find proteins for B0VDX7 (Acinetobacter baumannii (strain AYE)) Explore B0VDX7 Go to UniProtKB: B0VDX7
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	B0VDX7
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 2.50 Å
R-Value Free: 0.253 (Depositor), 0.253 (DCC)
R-Value Work: 0.213 (Depositor), 0.214 (DCC)
R-Value Observed: 0.215 (Depositor)

Space Group: P 2₁ 2 2₁

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 72.98	α = 90
b = 89.79	β = 90
c = 108.38	γ = 90

Software Package:

Software Name	Purpose
REFMAC	refinement
HKL-2000	data reduction
SCALEPACK	data scaling
MOLREP	phasing

Structure Validation

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Entry History

Deposition Data

Released Date: 2017-01-18

Deposition Author(s):

Revision History (Full details and data files)

Version 1.0: 2017-01-18
Type: Initial release
Version 1.1: 2022-05-18
Changes: Database references
Version 1.2: 2023-11-22
Changes: Data collection, Refinement description

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.