5WPY

Solution Structure of KstB-PCP loaded with nicotinic acid in kosinostatin biosynthesis

PDB DOI: https://doi.org/10.2210/pdb5WPY/pdb

Classification: TRANSPORT PROTEIN
Organism(s): Micromonospora okii
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2016-11-21 Released: 2017-11-29
Deposition Author(s): Zhao, B., Lan, W., Tang, G., Cao, C.

Experimental Data Snapshot

Method: SOLUTION NMR
Conformers Calculated: 100
Conformers Submitted: 20
Selection Criteria: structures with the lowest energy

wwPDB Validation 3D Report Full Report

This is version 1.1 of the entry. See complete history.

Literature

major solution Structure of KstB-PCP in kosinostatin biosynthesis

Zhao, B., Lan, W., Tang, G., Cao, C.

To be published.

Macromolecule Content

Total Structure Weight: 10.02 kDa
Atom Count: 703
Modelled Residue Count: 89
Deposited Residue Count: 89
Unique protein chains: 1

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Peptidyl carrier protein	A	89	Micromonospora okii	Mutation(s): 0
UniProt
Find proteins for A0A023GUP0 (Micromonospora okii) Explore A0A023GUP0 Go to UniProtKB: A0A023GUP0
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	A0A023GUP0
Sequence Annotations Expand
Reference Sequence

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
PN7 Query on PN7 Download Ideal Coordinates CCD File SDF format, chain B [auth A] MOL2 format, chain B [auth A]	B [auth A]	N~3~-[(2S)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-N-(2-sulfanylethyl)-beta-alaninamide C₁₁ H₂₃ N₂ O₇ P S JDMUPRLRUUMCTL-SECBINFHSA-N		Interactions Focus chain B [auth A]

Experimental Data & Validation

Experimental Data

Method: SOLUTION NMR
Conformers Calculated: 100
Conformers Submitted: 20
Selection Criteria: structures with the lowest energy

Structure Validation

View Full Validation Report

Entry History

Deposition Data

Released Date: 2017-11-29

Deposition Author(s):

Revision History (Full details and data files)

Version 1.0: 2017-11-29
Type: Initial release
Version 1.1: 2023-06-14
Changes: Data collection, Database references, Other

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.