5UY2 | pdb_00005uy2

peptide 38146 derived from fragment 41-60 of Plasmodium falciparum Thrombospondin-Related Sporozoite Protein (TRSP)

PDB DOI: https://doi.org/10.2210/pdb5UY2/pdb
BMRB: 30248

Classification: CELL INVASION
Organism(s): Plasmodium falciparum 3D7
Mutation(s): No

Deposited: 2017-02-23 Released: 2018-06-13
Deposition Author(s): Bermudez, A., Patarroyo, M.E.

Experimental Data Snapshot

Method: SOLUTION NMR
Conformers Calculated: 50
Conformers Submitted: 24
Selection Criteria: structures with the lowest energy

wwPDB Validation 3D Report Full Report

Validation slider image for 5UY2

This is version 1.2 of the entry. See complete history.

Literature

peptide 38146 derived from fragment 41-60 of Plasmodium falciparum Thrombospondin-Related Sporozoite Protein (TRSP)

Bermudez, A., Patarroyo, M.E.

To be published.

Macromolecule Content

Total Structure Weight: 2.46 kDa
Atom Count: 174
Modeled Residue Count: 20
Deposited Residue Count: 20
Unique protein chains: 1

Macromolecules

Find similar proteins by: Sequence | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
20-mer Peptide 38146	A	20	Plasmodium falciparum 3D7	Mutation(s): 0
UniProt
Find proteins for Q8I2A0 (Plasmodium falciparum (isolate 3D7)) Explore Q8I2A0 Go to UniProtKB: Q8I2A0
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q8I2A0
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: SOLUTION NMR
Conformers Calculated: 50
Conformers Submitted: 24
Selection Criteria: structures with the lowest energy

Structure Validation

View Full Validation Report

View more in-depth experimental data

Entry History

Deposition Data

Released Date: 2018-06-13

Deposition Author(s):

Patarroyo, M.E.

Revision History (Full details and data files)

Version 1.0: 2018-06-13
Type: Initial release
Version 1.1: 2023-06-14
Changes: Data collection, Database references, Other
Version 1.2: 2024-05-15
Changes: Data collection, Database references

RCSB PDB is hosted by

RCSB PDB is a member of

RCSB Partners
Nucleic Acid Knowledgebase

CoreTrustSeal

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.