5O51 | pdb_00005o51

AfRom2 CNH domain

PDB DOI: https://doi.org/10.2210/pdb5O51/pdb

Classification: PROTEIN BINDING
Organism(s): Aspergillus fumigatus Af293
Expression System: Escherichia coli BL21
Mutation(s): No

Deposited: 2017-05-31 Released: 2018-06-13
Deposition Author(s): Wei, W., van Aalten, D.
Funding Organization(s): Medical Research Council (United Kingdom)

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.01 Å
R-Value Free:
0.248 (Depositor), 0.249 (DCC)
R-Value Work:
0.205 (Depositor), 0.214 (DCC)
R-Value Observed:
0.207 (Depositor)

wwPDB Validation 3D Report Full Report

Validation slider image for 5O51

This is version 1.2 of the entry. See complete history.

Literature

Rom2 CNH domain from Aspergillus fumigatus is an atypical seven-bladed WD-40 protein

Wei, W., van Aalten, D.

To be published.

Macromolecule Content

Total Structure Weight: 38.36 kDa
Atom Count: 2,539
Modeled Residue Count: 309
Deposited Residue Count: 338
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Rho guanyl nucleotide exchange factor (Rom2), putative	A	338	Aspergillus fumigatus Af293	Mutation(s): 0 Gene Names: AFUA_5G08550
UniProt
Find proteins for Q4WUI2 (Aspergillus fumigatus (strain ATCC MYA-4609 / CBS 101355 / FGSC A1100 / Af293)) Explore Q4WUI2 Go to UniProtKB: Q4WUI2
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q4WUI2
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 2.01 Å
R-Value Free: 0.248 (Depositor), 0.249 (DCC)
R-Value Work: 0.205 (Depositor), 0.214 (DCC)
R-Value Observed: 0.207 (Depositor)

Diffraction Data:

Space Group: P 2₁ 2₁ 2

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 77.98	α = 90
b = 93.71	β = 90
c = 52.6	γ = 90

Software Package:

Software Name	Purpose
REFMAC	refinement
xia2	data reduction
xia2	data scaling
MOLREP	phasing

Structure Validation

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View more in-depth experimental data

Entry History

& Funding Information

Deposition Data

Released Date: 2018-06-13

Deposition Author(s):

Funding Organization	Location	Grant Number
Medical Research Council (United Kingdom)	United Kingdom	--

Revision History (Full details and data files)

Version 1.0: 2018-06-13
Type: Initial release
Version 1.1: 2019-10-16
Changes: Data collection
Version 1.2: 2024-05-08
Changes: Data collection, Database references

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.