Human N-myristoyltransferase 1 (MNT1) with Myristoyl-CoA analogue X10 bound.
Shen, M., Perez-Dorado, I., Fedoryshchak, R., Tate, E.W.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Glycylpeptide N-tetradecanoyltransferase 1 | 391 | Homo sapiens | Mutation(s): 0  Gene Names: NMT1, NMT EC: 2.3.1.97 | ![]() | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P30419 (Homo sapiens) Explore P30419  Go to UniProtKB:  P30419 | |||||
PHAROS:  P30419 GTEx:  ENSG00000136448  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P30419 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 3 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
94Q Query on 94Q | E [auth A], I [auth B] | ~{S}-[2-[3-[[(2~{S})-4-[[[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-4-oxidanyl-3-phosphonooxy-oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-oxidanyl-phosphoryl]oxy-3,3-dimethyl-2-oxidanyl-butanoyl]amino]propanoylamino]ethyl] 9-(3-but-3-ynyl-1,2-diazirin-3-yl)nonanethioate C35 H56 N9 O17 P3 S MSSDNISEPWMHOQ-CUJMRACVSA-N | |||
GOL Query on GOL | C [auth A], D [auth A], G [auth B], H [auth B] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N | |||
MG Query on MG | F [auth A], J [auth B] | MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 79.972 | α = 90 |
b = 177.454 | β = 90 |
c = 58.244 | γ = 90 |
Software Name | Purpose |
---|---|
Coot | model building |
PHENIX | refinement |
PDB_EXTRACT | data extraction |
PHASER | phasing |
XDS | data reduction |
Aimless | data scaling |
Funding Organization | Location | Grant Number |
---|---|---|
MMV | United Kingdom | -- |
Lee family scholarship | United Kingdom | -- |