5MQ4 | pdb_00005mq4

Crystal Structure of the leucine zipper of human PRKCBP1

PDB DOI: https://doi.org/10.2210/pdb5MQ4/pdb

Classification: TRANSFERASE
Organism(s): Homo sapiens
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2016-12-20 Released: 2017-01-25
Deposition Author(s): Krojer, T., Savitsky, P., Picaud, S., Newman, J., Tallant, C., Heroven, C., von Delft, F., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Filippakopoulos, P.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.70 Å
R-Value Free:
0.236 (Depositor), 0.240 (DCC)
R-Value Work:
0.208 (Depositor), 0.210 (DCC)
R-Value Observed:
0.210 (Depositor)

wwPDB Validation 3D Report Full Report

This is version 1.1 of the entry. See complete history.

Literature

Crystal Structure of the leucine zipper of human PRKCBP1

Krojer, T., Savitsky, P., Picaud, S., Filippakopoulos, P.

To be published.

Macromolecule Content

Total Structure Weight: 91.61 kDa
Atom Count: 5,558
Modeled Residue Count: 674
Deposited Residue Count: 762
Unique protein chains: 1

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Protein kinase C-binding protein 1	A, B, C, D, E A, B, C, D, E, F	127	Homo sapiens	Mutation(s): 0 Gene Names: ZMYND8, KIAA1125, PRKCBP1, RACK7
UniProt & NIH Common Fund Data Resources
Find proteins for Q9ULU4 (Homo sapiens) Explore Q9ULU4 Go to UniProtKB: Q9ULU4
PHAROS: Q9ULU4 GTEx: ENSG00000101040
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	Q9ULU4
Sequence Annotations Expand
Reference Sequence

Small Molecules

Ligands 2 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
SO4 Query on SO4 Download Ideal Coordinates CCD File SDF format, chain J [auth B] SDF format, chain O [auth D] SDF format, chain R [auth E] SDF format, chain U [auth F] SDF format, chain G [auth A] MOL2 format, chain J [auth B] MOL2 format, chain O [auth D] MOL2 format, chain R [auth E] MOL2 format, chain U [auth F] MOL2 format, chain G [auth A] mmCIF format, chain J [auth B] mmCIF format, chain O [auth D] mmCIF format, chain R [auth E] mmCIF format, chain U [auth F] mmCIF format, chain G [auth A]	G [auth A], J [auth B], O [auth D], R [auth E], U [auth F]	SULFATE ION O₄ S QAOWNCQODCNURD-UHFFFAOYSA-L		Interactions Focus chain G [auth A] Focus chain J [auth B] Focus chain O [auth D] Focus chain R [auth E] Focus chain U [auth F] Interactions & Density Focus chain G [auth A] Focus chain J [auth B] Focus chain O [auth D] Focus chain R [auth E] Focus chain U [auth F]
ZN Query on ZN Download Ideal Coordinates CCD File SDF format, chain I [auth A] SDF format, chain K [auth B] SDF format, chain M [auth C] SDF format, chain P [auth D] SDF format, chain Q [auth D] SDF format, chain S [auth E] SDF format, chain T [auth E] SDF format, chain V [auth F] SDF format, chain W [auth F] SDF format, chain N [auth C] SDF format, chain L [auth B] SDF format, chain H [auth A] MOL2 format, chain I [auth A] MOL2 format, chain K [auth B] MOL2 format, chain M [auth C] MOL2 format, chain P [auth D] MOL2 format, chain Q [auth D] MOL2 format, chain S [auth E] MOL2 format, chain T [auth E] MOL2 format, chain V [auth F] MOL2 format, chain W [auth F] MOL2 format, chain N [auth C] MOL2 format, chain L [auth B] MOL2 format, chain H [auth A] mmCIF format, chain I [auth A] mmCIF format, chain K [auth B] mmCIF format, chain M [auth C] mmCIF format, chain P [auth D] mmCIF format, chain Q [auth D] mmCIF format, chain S [auth E] mmCIF format, chain T [auth E] mmCIF format, chain V [auth F] mmCIF format, chain W [auth F] mmCIF format, chain N [auth C] mmCIF format, chain L [auth B] mmCIF format, chain H [auth A]	H [auth A] I [auth A] K [auth B] L [auth B] M [auth C] H [auth A], I [auth A], K [auth B], L [auth B], M [auth C], N [auth C], P [auth D], Q [auth D], S [auth E], T [auth E], V [auth F], W [auth F]	ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N		Interactions Focus chain H [auth A] Focus chain I [auth A] Focus chain K [auth B] Focus chain L [auth B] Focus chain M [auth C] Focus chain N [auth C] Focus chain P [auth D] Focus chain Q [auth D] Focus chain S [auth E] Focus chain T [auth E] Focus chain V [auth F] Focus chain W [auth F] Interactions & Density Focus chain H [auth A] Focus chain I [auth A] Focus chain K [auth B] Focus chain L [auth B] Focus chain M [auth C] Focus chain N [auth C] Focus chain P [auth D] Focus chain Q [auth D] Focus chain S [auth E] Focus chain T [auth E] Focus chain V [auth F] Focus chain W [auth F]