THE CRYSTAL STRUCTURE OF IGE FC MUTANT - P333C
Dhaliwal, B., Pang, M.O.Y., Keeble, A.H., Taylor, A.I., James, L.K., Gould, H.J., McDonnell, J.M., Beavil, A.J., Sutton, B.J.To be published.
Experimental Data Snapshot
Starting Model: experimental
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wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Ig epsilon chain C region | 319 | Homo sapiens | Mutation(s): 1  Gene Names: IGHE | ![]() | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P01854 (Homo sapiens) Explore P01854  Go to UniProtKB:  P01854 | |||||
PHAROS:  P01854 GTEx:  ENSG00000211891  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P01854 | ||||
Glycosylation | |||||
Glycosylation Sites: 1 | Go to GlyGen: P01854-2 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 2 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Ig epsilon chain C region | 320 | Homo sapiens | Mutation(s): 1  Gene Names: IGHE | ![]() | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P01854 (Homo sapiens) Explore P01854  Go to UniProtKB:  P01854 | |||||
PHAROS:  P01854 GTEx:  ENSG00000211891  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P01854 | ||||
Glycosylation | |||||
Glycosylation Sites: 1 | Go to GlyGen: P01854-2 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 3 | |||||
---|---|---|---|---|---|
Molecule | Chains | Length | 2D Diagram | Glycosylation | 3D Interactions |
alpha-D-mannopyranose-(1-3)-alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | C | 5 | N-Glycosylation | ||
Glycosylation Resources | |||||
GlyTouCan:  G10756ZZ GlyCosmos:  G10756ZZ GlyGen:  G10756ZZ |
Entity ID: 4 | |||||
---|---|---|---|---|---|
Molecule | Chains | Length | 2D Diagram | Glycosylation | 3D Interactions |
alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-4)]alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | D | 7 | N-Glycosylation | ||
Glycosylation Resources | |||||
GlyTouCan:  G76464YC GlyCosmos:  G76464YC GlyGen:  G76464YC |
Ligands 3 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
PG4 Query on PG4 | H [auth A], I [auth A] | TETRAETHYLENE GLYCOL C8 H18 O5 UWHCKJMYHZGTIT-UHFFFAOYSA-N | |||
SO4 Query on SO4 | E [auth A], F [auth A], G [auth A], K [auth B] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L | |||
GOL Query on GOL | J [auth B] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 129.45 | α = 90 |
b = 74.91 | β = 90 |
c = 79.06 | γ = 90 |
Software Name | Purpose |
---|---|
MOSFLM | data collection |
Aimless | data scaling |
PHASER | phasing |
BUSTER-TNT | refinement |
PDB_EXTRACT | data extraction |
iMOSFLM | data reduction |
PHASER | phasing |
Funding Organization | Location | Grant Number |
---|---|---|
Medical Research Council (United Kingdom) | United Kingdom | -- |
Wellcome Trust | United Kingdom | -- |
Asthma UK | United Kingdom | -- |