Structure of the W153F variant of catalase-peroxidase of B. pseudomallei at 1.87 Angstroms.
Loewen, P.C.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Catalase-peroxidase | 728 | Burkholderia pseudomallei 1710b | Mutation(s): 1  Gene Names: katG, BURPS1710b_3366 EC: 1.11.1.21 | ![]() | |
UniProt | |||||
Find proteins for Q3JNW6 (Burkholderia pseudomallei (strain 1710b)) Explore Q3JNW6  Go to UniProtKB:  Q3JNW6 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q3JNW6 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 5 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
HEM Query on HEM | C [auth A], I [auth B] | PROTOPORPHYRIN IX CONTAINING FE C34 H32 Fe N4 O4 KABFMIBPWCXCRK-RGGAHWMASA-L | |||
MPD Query on MPD | G [auth A], H [auth A], M [auth B] | (4S)-2-METHYL-2,4-PENTANEDIOL C6 H14 O2 SVTBMSDMJJWYQN-YFKPBYRVSA-N | |||
PO4 Query on PO4 | F [auth A], L [auth B] | PHOSPHATE ION O4 P NBIIXXVUZAFLBC-UHFFFAOYSA-K | |||
OXY Query on OXY | E [auth A], K [auth B] | OXYGEN MOLECULE O2 MYMOFIZGZYHOMD-UHFFFAOYSA-N | |||
NA Query on NA | D [auth A], J [auth B] | SODIUM ION Na FKNQFGJONOIPTF-UHFFFAOYSA-N |
Modified Residues 1 Unique | |||||
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ID | Chains | Type | Formula | 2D Diagram | Parent |
TOX Query on TOX | A, B | L-PEPTIDE LINKING | C11 H12 N2 O4 | TRP |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 100.922 | α = 90 |
b = 116.13 | β = 90 |
c = 175.788 | γ = 90 |
Software Name | Purpose |
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SCALA | data scaling |
REFMAC | refinement |
PDB_EXTRACT | data extraction |
XDS | data reduction |
Funding Organization | Location | Grant Number |
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Natural Sciences and Engineering Research Council (NSERC, Canada) | Canada | D9600 |