To be published
Taylor, M.W., Lee, J.E.To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Deoxycytidine deaminase | 139 | Brassica oleracea var. capitata | Mutation(s): 0  | ||
UniProt | |||||
Find proteins for H2EMX8 (Brassica oleracea var. capitata) Explore H2EMX8  Go to UniProtKB:  H2EMX8 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | H2EMX8 | ||||
Sequence AnnotationsExpand | |||||
|
Ligands 5 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
HEZ Query on HEZ | H [auth A], U [auth D] | HEXANE-1,6-DIOL C6 H14 O2 XXMIOPMDWAUFGU-UHFFFAOYSA-N | |||
GOL Query on GOL | O [auth C], P [auth C], Q [auth C] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N | |||
ZN Query on ZN | F [auth A], J [auth B], N [auth C], T [auth D] | ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N | |||
ACT Query on ACT | G [auth A], K [auth B], L [auth B], R [auth C] | ACETATE ION C2 H3 O2 QTBSBXVTEAMEQO-UHFFFAOYSA-M | |||
CL Query on CL | E [auth A], I [auth B], M [auth C], S [auth D] | CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 99.808 | α = 90 |
b = 99.808 | β = 90 |
c = 143.061 | γ = 90 |
Software Name | Purpose |
---|---|
PHENIX | refinement |
PHASER | phasing |
PDB_EXTRACT | data extraction |
Aimless | data scaling |
Coot | model building |
XDS | data reduction |
Funding Organization | Location | Grant Number |
---|---|---|
Canadian Institutes of Health Research (CIHR) | Canada | -- |