The crystal structure of Se-AsfvPolX(L52/163M mutant) in complex with 1nt-gap DNA1
Chen, Y.Q., Zhang, J., Gan, J.H.To be published.
Experimental Data Snapshot
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
DNA polymerase beta-like protein | A, E [auth B] | 178 | African swine fever virus | Mutation(s): 2  Gene Names: O174L | ![]() |
UniProt | |||||
Find proteins for P42494 (African swine fever virus (strain Badajoz 1971 Vero-adapted)) Explore P42494  Go to UniProtKB:  P42494 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P42494 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 2 | |||||
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Molecule | Chains | Length | Organism | Image | |
DNA (5'-D(*CP*GP*TP*TP*CP*TP*AP*TP*GP*TP*GP*TP*AP*CP*TP*CP*AP*C)-3') | B [auth C], F | 18 | synthetic construct | ![]() | |
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Entity ID: 3 | |||||
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Molecule | Chains | Length | Organism | Image | |
DNA (5'-D(*GP*TP*GP*AP*GP*TP*AP*CP*A*)-3') | C [auth D], G | 9 | synthetic construct | ![]() | |
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Entity ID: 4 | |||||
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Molecule | Chains | Length | Organism | Image | |
DNA (5'-D(P*AP*TP*AP*GP*AP*AP*CP*G)-3') | D [auth E], H | 8 | synthetic construct | ![]() | |
Sequence AnnotationsExpand | |||||
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Ligands 2 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
DGT Query on DGT | I [auth A], L [auth B] | 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE C10 H16 N5 O13 P3 HAAZLUGHYHWQIW-KVQBGUIXSA-N | |||
MN Query on MN | J [auth A], K [auth A], M [auth B], N [auth B] | MANGANESE (II) ION Mn WAEMQWOKJMHJLA-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
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a = 125.5 | α = 90 |
b = 70.03 | β = 90 |
c = 86.01 | γ = 90 |
Software Name | Purpose |
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PHENIX | refinement |
HKL-2000 | data reduction |
HKL-2000 | data scaling |
PHASER | phasing |