Crystal structure of the human BRPF1 bromodomain in complex with SEED21
Zhu, J., Wiedmer, L., Caflisch, A.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Peregrin | 116 | Homo sapiens | Mutation(s): 0  Gene Names: BRPF1, BR140 | ||
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P55201 (Homo sapiens) Explore P55201  Go to UniProtKB:  P55201 | |||||
PHAROS:  P55201 GTEx:  ENSG00000156983  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P55201 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 2 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
5SK Query on 5SK | B [auth A] | ~{N}-[(2~{R})-butan-2-yl]-1-methyl-[1,2,4]triazolo[4,3-a]quinoxalin-4-amine C14 H17 N5 NPOOPJOEQAWGNZ-SECBINFHSA-N | |||
NO3 Query on NO3 | C [auth A] | NITRATE ION N O3 NHNBFGGVMKEFGY-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
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a = 60.52 | α = 90 |
b = 60.52 | β = 90 |
c = 62.92 | γ = 120 |
Software Name | Purpose |
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PHENIX | refinement |
XDS | data reduction |
XSCALE | data scaling |
PHASER | phasing |
Funding Organization | Location | Grant Number |
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Swiss National Science Foundation | Switzerland | -- |