Crystal structure of TrmD, a M1G37 tRNA Methyltransferase with SAM-competitive compounds
Elkins, P.A., Bonnette, W.G., Madauss, K.P.To be published.
Experimental Data Snapshot
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
tRNA (guanine-N(1)-)-methyltransferase | 254 | Haemophilus influenzae Rd KW20 | Mutation(s): 0  Gene Names: trmD, HI_0202 EC: 2.1.1.228 | ||
UniProt | |||||
Find proteins for P43912 (Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)) Explore P43912  Go to UniProtKB:  P43912 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P43912 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 1 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
58G Query on 58G | B [auth A] | 6-{[(1R,3S)-3-phenylcyclopentyl]amino}pyridine-3-carboxamide C17 H19 N3 O JBSAILAEEJVXKB-DZGCQCFKSA-N |
Length ( Å ) | Angle ( ˚ ) |
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a = 94.784 | α = 90 |
b = 94.784 | β = 90 |
c = 178.164 | γ = 120 |
Software Name | Purpose |
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SCALA | data scaling |
PHENIX | refinement |
PDB_EXTRACT | data extraction |
PHASER | phasing |