Download Mendeleycrystal structure of acetyl esterase mutant S10A with acetate ion
Uechi, K., Kamachi, S., Akita, H., Mine, S., Watanabe, M.To be published.
5B5L
Crystal structure of acetyl esterase mutant S10A with acetate ion
- PDB DOI: https://doi.org/10.2210/pdb5B5L/pdb
- Classification: HYDROLASE
- Organism(s): Talaromyces pinophilus
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): Yes
- Deposited: 2016-05-12 Released: 2017-05-31
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.40 Å
- R-Value Free: 0.174
- R-Value Work: 0.121
- R-Value Observed: 0.124
wwPDB Validation 3D Report Full Report
This is version 1.1 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| acetyl esterase | 207 | Talaromyces pinophilus | Mutation(s): 1 Gene Names: axe, TCE0_004r00149 |  | |
UniProt | |||||
Find proteins for A0A0A8IBJ8 (Talaromyces pinophilus) Explore A0A0A8IBJ8 Go to UniProtKB: A0A0A8IBJ8 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | A0A0A8IBJ8 | ||||
Sequence AnnotationsExpand | |||||
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Small Molecules
| Ligands 4 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| PEG Query on PEG | E [auth A] F [auth A] G [auth A] H [auth A] I [auth A] | DI(HYDROXYETHYL)ETHER C4 H10 O3 MTHSVFCYNBDYFN-UHFFFAOYSA-N |  | ||
| ZN Query on ZN | D [auth A] | ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N |  | ||
| ACT Query on ACT | B [auth A] | ACETATE ION C2 H3 O2 QTBSBXVTEAMEQO-UHFFFAOYSA-M |  | ||
| CA Query on CA | C [auth A] | CALCIUM ION Ca BHPQYMZQTOCNFJ-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.40 Å
- R-Value Free: 0.174
- R-Value Work: 0.121
- R-Value Observed: 0.124
- Space Group: P 32 2 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 64.589 | α = 90 |
| b = 64.589 | β = 90 |
| c = 89.644 | γ = 120 |
| Software Name | Purpose |
|---|---|
| REFMAC | refinement |
| HKL-2000 | data reduction |
| HKL-2000 | data scaling |
| PHASER | phasing |
Entry History
Deposition Data
- Released Date: 2017-05-31 Deposition Author(s): Uechi, K., Kamachi, S., Akita, H., Mine, S., Watanabe, M.
Revision History (Full details and data files)
- Version 1.0: 2017-05-31
Type: Initial release - Version 1.1: 2023-11-08
Changes: Data collection, Database references, Derived calculations, Refinement description
