4W98

Acinetobacter baumannii SDF NDK

Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.43 Å
  • R-Value Free: 0.189 
  • R-Value Work: 0.163 
  • R-Value Observed: 0.164 

wwPDB Validation   3D Report Full Report


This is version 1.1 of the entry. See complete history. 


Literature

Structural and Functional Characterization of Acinetobacter baumannii Nucleoside Diphosphate Kinase

Hu, Y., Feng, F., Liu, Y.

(2015) PROG BIOCHEM BIOPHYS 42: 260-267


Macromolecules
Find similar proteins by: 
(by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Nucleoside diphosphate kinase145Acinetobacter baumannii SDFMutation(s): 0 
Gene Names: ndk, ABSDF3006
EC: 2.7.4.6
UniProt
Find proteins for B0VKS3 (Acinetobacter baumannii (strain SDF))
Explore B0VKS3 
Go to UniProtKB:  B0VKS3
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupB0VKS3
Sequence Annotations
Expand
  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.43 Å
  • R-Value Free: 0.189 
  • R-Value Work: 0.163 
  • R-Value Observed: 0.164 
  • Space Group: I 2 2 2
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 61.726α = 90
b = 76.962β = 90
c = 82.239γ = 90
Software Package:
Software NamePurpose
PHENIXrefinement

Structure Validation

View Full Validation Report



View more in-depth experimental data
Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2015-06-17
    Type: Initial release
  • Version 1.1: 2023-11-08
    Changes: Data collection, Database references, Derived calculations, Other, Refinement description, Source and taxonomy