4O5O

X-ray Crystal Structure of a 3-hydroxyacyl-CoA dehydrogenase from Brucella suis

• PDB DOI: https://doi.org/10.2210/pdb4O5O/pdb

• Classification: OXIDOREDUCTASE
• Organism(s): Brucella suis 1330
• Expression System: Escherichia coli
• Mutation(s): No 


• Deposited: 2013-12-19 Released: 2014-01-01 
• Deposition Author(s): Seattle Structural Genomics Center for Infectious Disease (SSGCID)

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 1.40 Å
• R-Value Free: 0.169 
• R-Value Work: 0.136 
• R-Value Observed: 0.137 

Literature

X-ray Crystal Structure of a 3-hydroxyacyl-CoA dehydrogenase from Brucella suis

Fairman, J.W., Abendroth, J., Edwards, T.E., Lorimer, D.

To be published.

Biological Assembly 1  

Global Symmetry: Dihedral - D2  (Explore in 3D)
Global Stoichiometry: Homo 4-mer - A4 

Biological assembly 1 generated by PISA (software)

Macromolecule Content

• Total Structure Weight: 54.86 kDa 
• Atom Count: 4,334 
• Modelled Residue Count: 518 
• Deposited Residue Count: 526 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
3-hydroxyacyl-CoA dehydrogenase	A, B	263	Brucella suis 1330	Mutation(s): 0  Gene Names: BRA0449, BS1330_II0446
UniProt
Find proteins for A0A0H3G6B0 (Brucella suis biovar 1 (strain 1330)) Explore A0A0H3G6B0  Go to UniProtKB:  A0A0H3G6B0

Small Molecules

Ligands 3 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram
TRS	F [auth B]	2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL C4 H12 N O3 LENZDBCJOHFCAS-UHFFFAOYSA-O
ZN	C [auth A]	ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N
EDO	D [auth B], E [auth B]	1,2-ETHANEDIOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 1.40 Å
• R-Value Free: 0.169 
• R-Value Work: 0.136 
• R-Value Observed: 0.137 
• Space Group: C 2 2 2₁
• Diffraction Data: https://doi.org/10.18430/M34O5O

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 76.47	α = 90
b = 92.24	β = 90
c = 135.49	γ = 90

Software Package:

Software Name	Purpose
XSCALE	data scaling
PHASER	phasing
REFMAC	refinement
PDB_EXTRACT	data extraction
XDS	data reduction

Structure Validation

Entry History 

Deposition Data

• Released Date: 2014-01-01 
Deposition Author(s): Seattle Structural Genomics Center for Infectious Disease (SSGCID)

Revision History  

• Version 1.0: 2014-01-01
  Type: Initial release
  
• Version 1.1: 2024-02-28
  Changes: Data collection, Database references, Derived calculations