4MOZ

Fructose-bisphosphate aldolase from Slackia heliotrinireducens DSM 20476

• PDB DOI: https://doi.org/10.2210/pdb4MOZ/pdb

• Classification: LYASE
• Organism(s): Slackia heliotrinireducens DSM 20476
• Expression System: Escherichia coli BL21(DE3)
• Mutation(s): No 


• Deposited: 2013-09-12 Released: 2013-09-25 
• Deposition Author(s): Chang, C., Li, H., Jedrzejczak, R., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 2.15 Å
• R-Value Free: 0.223 
• R-Value Work: 0.169 
• R-Value Observed: 0.172 

Literature

Fructose-bisphosphate aldolase from Slackia heliotrinireducens DSM 20476

Chang, C., Li, H., Jedrzejczak, R., Joachimiak, A.

To be published.

Biological Assembly 1  

Global Symmetry: Cyclic - C5  (Explore in 3D)
Global Stoichiometry: Homo 5-mer - A5 

Biological assembly 1 assigned by authors and generated by PISA (software)

Biological Assembly 2  

Global Symmetry: Dihedral - D5  (Explore in 3D)
Global Stoichiometry: Homo 10-mer - A10 

Biological assembly 2 generated by PISA (software)

Macromolecule Content

• Total Structure Weight: 173.01 kDa 
• Atom Count: 13,036 
• Modelled Residue Count: 1,575 
• Deposited Residue Count: 1,595 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Fructose-bisphosphate aldolase	A, B, C, D, E	319	Slackia heliotrinireducens DSM 20476	Mutation(s): 0  Gene Names: Shel_19790
UniProt
Find proteins for C7N7V8 (Slackia heliotrinireducens (strain ATCC 29202 / DSM 20476 / NCTC 11029 / RHS 1)) Explore C7N7V8  Go to UniProtKB:  C7N7V8

Small Molecules

Modified Residues  1 Unique
ID	Chains	Type	Formula	2D Diagram	Parent
MSE	A, B, C, D, E	L-PEPTIDE LINKING	C5 H11 N O2 Se		MET

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 2.15 Å
• R-Value Free: 0.223 
• R-Value Work: 0.169 
• R-Value Observed: 0.172 
• Space Group: C 2 2 2₁

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 135.783	α = 90
b = 174.202	β = 90
c = 203.023	γ = 90

Software Package:

Software Name	Purpose
REFMAC	refinement
PDB_EXTRACT	data extraction
SBC-Collect	data collection
HKL-3000	data reduction
HKL-3000	data scaling
HKL-3000	phasing
MLPHARE	phasing
DM	phasing
SHELXDE	phasing
ARP/wARP	model building
RESOLVE	phasing
Coot	model building

Structure Validation

Entry History 

Deposition Data

• Released Date: 2013-09-25 
Deposition Author(s): Chang, C., Li, H., Jedrzejczak, R., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)

Revision History  

• Version 1.0: 2013-09-25
  Type: Initial release
  
• Version 1.1: 2017-11-15
  Changes: Refinement description