Download MendeleyCrystal structure of a hypothetical protein (BACUNI_03039) from Bacteroides uniformis ATCC 8492 at 1.66 A resolution
Joint Center for Structural Genomics (JCSG)To be published.
4IAB
Crystal structure of a putative monosaccharide binding protein (BACUNI_03039) from Bacteroides uniformis ATCC 8492 at 1.70 A resolution
- PDB DOI: https://doi.org/10.2210/pdb4IAB/pdb
- Classification: Structural Genomics, Unknown Function
- Organism(s): Bacteroides uniformis ATCC 8492
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2012-12-06 Released: 2013-02-27
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.66 Å
- R-Value Free: 0.184
- R-Value Work: 0.163
- R-Value Observed: 0.164
wwPDB Validation 3D Report Full Report
This is version 1.4 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| hypothetical protein | 142 | Bacteroides uniformis ATCC 8492 | Mutation(s): 0 Gene Names: ZP_02071597.1 |  | |
UniProt | |||||
Find proteins for A7V626 (Bacteroides uniformis (strain ATCC 8492 / DSM 6597 / CCUG 4942 / CIP 103695 / JCM 5828 / KCTC 5204 / NCTC 13054 / VPI 0061)) Explore A7V626 Go to UniProtKB: A7V626 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | A7V626 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 3 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| PEG Query on PEG | H [auth B], I [auth B], J [auth B], L [auth C], N [auth D] | DI(HYDROXYETHYL)ETHER C4 H10 O3 MTHSVFCYNBDYFN-UHFFFAOYSA-N |  | ||
| GOL Query on GOL | F [auth A] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N |  | ||
| UNL Query on UNL | E [auth A], G [auth B], K [auth C], M [auth D] | Unknown ligand PEDCQBHIVMGVHV-UHFFFAOYSA-N | |||
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| MSE Query on MSE | A, B, C, D | L-PEPTIDE LINKING | C5 H11 N O2 Se |  | MET |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.66 Å
- R-Value Free: 0.184
- R-Value Work: 0.163
- R-Value Observed: 0.164
- Space Group: C 2 2 21
- Diffraction Data: https://doi.org/10.18430/M34IAB
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 43.731 | α = 90 |
| b = 213.875 | β = 90 |
| c = 153.643 | γ = 90 |
| Software Name | Purpose |
|---|---|
| MolProbity | model building |
| PDB_EXTRACT | data extraction |
| SHELX | phasing |
| SHARP | phasing |
| XSCALE | data scaling |
| REFMAC | refinement |
| XDS | data reduction |
| SHELXD | phasing |
Entry History
Deposition Data
- Released Date: 2013-02-27 Deposition Author(s): Joint Center for Structural Genomics (JCSG)
Revision History (Full details and data files)
- Version 1.0: 2013-02-27
Type: Initial release - Version 1.1: 2014-12-24
Changes: Structure summary - Version 1.2: 2017-11-15
Changes: Refinement description - Version 1.3: 2018-01-24
Changes: Database references - Version 1.4: 2023-02-01
Changes: Database references, Derived calculations
