The structures of Escherichia coli exonuclease I in complex with the single strand DNA
Qiu, R., Lou, T., Wei, J., Liu, M., Gu, S., Tang, R., Ji, C., Gong, W.To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Exodeoxyribonuclease I | 481 | Escherichia coli DH5[alpha] | Mutation(s): 0  Gene Names: b2011, cpeA, JW1993, sbcB, xonA EC: 3.1.11.1 | ||
UniProt | |||||
Find proteins for P04995 (Escherichia coli (strain K12)) Explore P04995  Go to UniProtKB:  P04995 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P04995 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 2 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
SO4 Query on SO4 | F [auth A] G [auth A] H [auth A] I [auth A] L [auth B] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L | |||
GOL Query on GOL | E [auth A], J [auth B], K [auth B] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 62.544 | α = 90 |
b = 107.289 | β = 90 |
c = 157.574 | γ = 90 |
Software Name | Purpose |
---|---|
SCALEPACK | data scaling |
PHENIX | refinement |
PDB_EXTRACT | data extraction |
HKL-2000 | data collection |
HKL-2000 | data reduction |
HKL-2000 | data scaling |
PHASES | phasing |