Crystal Structure of JMJD2A Complexed with Inhibitor
King, O.N.F., Krojer, T., Arrowsmith, C.H., Edwards, A., Bountra, C., McDonough, M.A., Schofield, C.J., Structural Genomics Consortium (SGC)To be published.
Experimental Data Snapshot
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Lysine-specific demethylase 4A | 381 | Homo sapiens | Mutation(s): 0  Gene Names: KDM4A, JHDM3A, JMJD2, JMJD2A, KIAA0677 EC: 1.14.11 (PDB Primary Data), 1.14.11.66 (UniProt), 1.14.11.69 (UniProt) | ||
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for O75164 (Homo sapiens) Explore O75164  Go to UniProtKB:  O75164 | |||||
PHAROS:  O75164 GTEx:  ENSG00000066135  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | O75164 | ||||
Sequence AnnotationsExpand | |||||
|
Ligands 4 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
0WS Query on 0WS | F [auth A], L [auth B] | 2-(1H-pyrazol-3-yl)pyridine-4-carboxylic acid C9 H7 N3 O2 NTNYOLXCVCDWFY-UHFFFAOYSA-N | |||
ZN Query on ZN | D [auth A], H [auth B] | ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N | |||
NI Query on NI | C [auth A], G [auth B] | NICKEL (II) ION Ni VEQPNABPJHWNSG-UHFFFAOYSA-N | |||
CL Query on CL | E [auth A], I [auth B], J [auth B], K [auth B] | CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 100.75 | α = 90 |
b = 150.03 | β = 90 |
c = 57.49 | γ = 90 |
Software Name | Purpose |
---|---|
GDA | data collection |
PHASER | phasing |
BUSTER | refinement |
XDS | data reduction |
SCALA | data scaling |