Download MendeleyCrystal Structure of Putative Thioredoxin Reductase TrxB from Bacillus anthracis
Maltseva, N., Kim, Y., Kwon, K., Anderson, W.F., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)To be published.
4FK1
Crystal Structure of Putative Thioredoxin Reductase TrxB from Bacillus anthracis
- PDB DOI: https://doi.org/10.2210/pdb4FK1/pdb
- Classification: OXIDOREDUCTASE
- Organism(s): Bacillus anthracis str. 'Ames Ancestor
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2012-06-12 Released: 2012-08-08
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.40 Å
- R-Value Free: 0.229
- R-Value Work: 0.171
- R-Value Observed: 0.174
Starting Model: experimental
View more details
This is version 1.2 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Putative thioredoxin reductase | 304 | Bacillus anthracis str. 'Ames Ancestor | Mutation(s): 0 Gene Names: BA_2768, GBAA_2768 |  | |
UniProt | |||||
Find proteins for A0A6L8PLA6 (Bacillus anthracis) Explore A0A6L8PLA6 Go to UniProtKB: A0A6L8PLA6 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | A0A6L8PLA6 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 2 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Putative thioredoxin reductase | 304 | Bacillus anthracis str. 'Ames Ancestor | Mutation(s): 0 Gene Names: BA_2768, GBAA_2768 |  | |
UniProt | |||||
Find proteins for A0A6L8PLA6 (Bacillus anthracis) Explore A0A6L8PLA6 Go to UniProtKB: A0A6L8PLA6 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | A0A6L8PLA6 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 3 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| FAD Query on FAD | E [auth A], G [auth B], H [auth C], K [auth D] | FLAVIN-ADENINE DINUCLEOTIDE C27 H33 N9 O15 P2 VWWQXMAJTJZDQX-UYBVJOGSSA-N |  | ||
| GOL Query on GOL | M [auth D] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N |  | ||
| MG Query on MG | F [auth A], I [auth C], J [auth C], L [auth D] | MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N |  | ||
| Modified Residues 2 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| MSE Query on MSE | A, B, D | L-PEPTIDE LINKING | C5 H11 N O2 Se |  | MET |
| MSO Query on MSO | C | L-PEPTIDE LINKING | C5 H11 N O3 Se |  | MET |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.40 Å
- R-Value Free: 0.229
- R-Value Work: 0.171
- R-Value Observed: 0.174
- Space Group: P 1 21 1
- Diffraction Data: https://doi.org/10.18430/m34fk1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 82.558 | α = 90 |
| b = 54.096 | β = 93.04 |
| c = 140.037 | γ = 90 |
| Software Name | Purpose |
|---|---|
| SBC-Collect | data collection |
| HKL-3000 | data collection |
| HKL-3000 | phasing |
| MOLREP | phasing |
| PHENIX | refinement |
| HKL-3000 | data reduction |
| HKL-3000 | data scaling |
Entry History
Deposition Data
- Released Date: 2012-08-08 Deposition Author(s): Maltseva, N., Kim, Y., Kwon, K., Anderson, W.F., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
Revision History (Full details and data files)
- Version 1.0: 2012-08-08
Type: Initial release - Version 1.1: 2023-09-13
Changes: Data collection, Database references, Derived calculations, Refinement description - Version 1.2: 2023-12-06
Changes: Data collection
