The structure of Glucose-6-phosphate isomerase (GPI) from Brucella melitensis
Clifton, M.C., Edwards, T.E., Seattle Structural Genomics Center for Infectious Disease (SSGCID)To be published.
Experimental Data Snapshot
Starting Model: experimental
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wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Glucose-6-phosphate isomerase | A [auth D], B [auth A], C [auth B], D [auth C] | 553 | Brucella melitensis bv. 1 str. 16M | Mutation(s): 0  Gene Names: pgi, BMEI1636 EC: 5.3.1.9 | |
UniProt | |||||
Find proteins for Q8YF86 (Brucella melitensis biotype 1 (strain ATCC 23456 / CCUG 17765 / NCTC 10094 / 16M)) Explore Q8YF86  Go to UniProtKB:  Q8YF86 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q8YF86 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 3 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
EDO Query on EDO | N [auth C] | 1,2-ETHANEDIOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N | |||
CA Query on CA | F [auth D] G [auth A] K [auth B] M [auth B] P [auth C] | CALCIUM ION Ca BHPQYMZQTOCNFJ-UHFFFAOYSA-N | |||
CL Query on CL | E [auth D] H [auth A] I [auth A] J [auth B] L [auth B] | CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M |
Length ( Å ) | Angle ( ˚ ) |
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a = 71.59 | α = 95.42 |
b = 72.73 | β = 91.54 |
c = 115.25 | γ = 110.06 |
Software Name | Purpose |
---|---|
XSCALE | data scaling |
PHASER | phasing |
REFMAC | refinement |
PDB_EXTRACT | data extraction |
XDS | data reduction |