4ELO

Ferric binding protein in apo form 1

PDB DOI: https://doi.org/10.2210/pdb4ELO/pdb

Classification: METAL TRANSPORT
Organism(s): Thermus thermophilus HB8
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2012-04-11 Released: 2013-04-17
Deposition Author(s): Wang, Q., Liu, X.Q., Wang, X.Q.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.91 Å
R-Value Free: 0.207
R-Value Work: 0.163
R-Value Observed: 0.166

wwPDB Validation 3D Report Full Report

This is version 1.1 of the entry. See complete history.

Literature

Crystal structure of the ferric binding protein A

Wang, Q., Liu, X.Q., Wang, X.Q.

To be published.

Macromolecule Content

Total Structure Weight: 222.14 kDa
Atom Count: 15,969
Modelled Residue Count: 1,848
Deposited Residue Count: 2,016
Unique protein chains: 1

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Iron ABC transporter, periplasmic iron-binding protein	A, B, C, D, E A, B, C, D, E, F	336	Thermus thermophilus HB8	Mutation(s): 0 Gene Names: TTHA1628
UniProt
Find proteins for Q5SHV2 (Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8)) Explore Q5SHV2 Go to UniProtKB: Q5SHV2
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	Q5SHV2
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 1.91 Å
R-Value Free: 0.207
R-Value Work: 0.163
R-Value Observed: 0.166
Space Group: P 2₁ 2₁ 2₁

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 42.124	α = 90
b = 139.349	β = 90
c = 326.337	γ = 90

Software Package:

Software Name	Purpose
HKL-2000	data collection
PHASER	phasing
PHENIX	refinement
HKL-2000	data reduction
HKL-2000	data scaling

Structure Validation

View Full Validation Report

Entry History

Deposition Data

Released Date: 2013-04-17

Deposition Author(s):

Revision History (Full details and data files)

Version 1.0: 2013-04-17
Type: Initial release
Version 1.1: 2024-03-20
Changes: Data collection, Database references

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.