4E4B | pdb_00004e4b

Structure of the fusidic acid resistance protein FusB

PDB DOI: https://doi.org/10.2210/pdb4E4B/pdb

Classification: METAL BINDING PROTEIN
Organism(s): Staphylococcus aureus
Expression System: Escherichia coli BL21(DE3)
Mutation(s): No

Deposited: 2012-03-12 Released: 2013-03-27
Deposition Author(s): Cox, G., Edwards, T.A., O'Neill, A.J.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.80 Å
R-Value Free:
0.314 (Depositor), 0.308 (DCC)
R-Value Work:
0.241 (Depositor), 0.242 (DCC)
R-Value Observed:
0.245 (Depositor)

Starting Model: experimental
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wwPDB Validation 3D Report Full Report

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This is version 1.1 of the entry. See complete history.

Literature

Investigating the FusB:EF-G interface

Cox, G., Edwards, T.A., O'Neill, A.J.

To be published.

Macromolecule Content

Total Structure Weight: 25.57 kDa
Atom Count: 1,778
Modeled Residue Count: 213
Deposited Residue Count: 216
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Far1	A	216	Staphylococcus aureus	Mutation(s): 0 Gene Names: far1, fusB
UniProt
Find proteins for Q8GNY5 (Staphylococcus aureus) Explore Q8GNY5 Go to UniProtKB: Q8GNY5
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q8GNY5
Sequence Annotations Expand
Reference Sequence

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
ZN Query on ZN Download:Ideal Coordinates CCD File SDF format, chain B [auth A] MOL2 format, chain B [auth A] mmCIF format, chain B [auth A]	B [auth A]	ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N		Interactions Focus chain B [auth A] Interactions & Density Focus chain B [auth A]

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 2.80 Å
R-Value Free: 0.314 (Depositor), 0.308 (DCC)
R-Value Work: 0.241 (Depositor), 0.242 (DCC)
R-Value Observed: 0.245 (Depositor)

Space Group: I 2 2 2

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 55.37	α = 90
b = 89.1	β = 90
c = 107.9	γ = 90

Software Package:

Software Name	Purpose
iMOSFLM	data reduction
PHASER	phasing
REFMAC	refinement
MOSFLM	data reduction
SCALA	data scaling

Structure Validation

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Entry History

Deposition Data

Released Date: 2013-03-27

Deposition Author(s):

Revision History (Full details and data files)

Version 1.0: 2013-03-27
Type: Initial release
Version 1.1: 2023-09-13
Changes: Data collection, Database references, Derived calculations, Refinement description

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.