The crystal structure of DNA starvation/stationary phase protection protein Dps from Yersinia pestis KIM 10
Tan, K., Gu, M., Kwon, K., Anderson, W.F., Joachimiak, A.To be published.
Experimental Data Snapshot
Starting Model: experimental
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wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
DNA protection during starvation protein | 170 | Yersinia pestis KIM10+ | Mutation(s): 0  Gene Names: dps, y1677, Yersinia pestis, YPO2510, YP_2325 EC: 1.16 | ||
UniProt | |||||
Find proteins for Q7CJ65 (Yersinia pestis) Explore Q7CJ65  Go to UniProtKB:  Q7CJ65 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q7CJ65 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 2 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
SO4 Query on SO4 | AA [auth F] BA [auth G] DA [auth H] GA [auth J] HA [auth J] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L | |||
ZN Query on ZN | CA [auth H] EA [auth I] FA [auth J] IA [auth K] KA [auth L] | ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 105.414 | α = 90 |
b = 105.102 | β = 90 |
c = 191.834 | γ = 90 |
Software Name | Purpose |
---|---|
SBC-Collect | data collection |
MOLREP | phasing |
PHENIX | refinement |
HKL-3000 | data reduction |
HKL-3000 | data scaling |