4CP6 | pdb_00004cp6

The Crystal structure of Pneumococcal vaccine antigen PcpA

PDB DOI: https://doi.org/10.2210/pdb4CP6/pdb

Classification: CHOLINE-BINDING PROTEIN
Organism(s): Streptococcus pneumoniae
Mutation(s): No

Deposited: 2014-01-31 Released: 2015-02-25
Deposition Author(s): Vallee, F., Steier, V., Oloo, E., Chawla, D., Vonrhein, C., Steinmetz, A., Mathieu, M., Rak, A., Mikol, V., Oomen, R.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.34 Å
R-Value Free:
0.186 (Depositor), 0.199 (DCC)
R-Value Work:
0.170 (Depositor), 0.179 (DCC)

wwPDB Validation 3D Report Full Report

Validation slider image for 4CP6

This is version 1.1 of the entry. See complete history.

Literature

The Crystal Structure of Pneumoccocal Vaccine Antigen Pcpa

Vallee, F., Steier, V., Oloo, E., Chawla, D., Vonrhein, C., Steinmetz, A., Mathieu, M., Rak, A., Mikol, V., Oomen, R.

To be published.

Macromolecule Content

Total Structure Weight: 49.5 kDa
Atom Count: 3,891
Modeled Residue Count: 405
Deposited Residue Count: 445
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
CHOLINE BINDING PROTEIN PCPA	A	445	Streptococcus pneumoniae	Mutation(s): 0
UniProt
Find proteins for A0ACD7PU69 (Streptococcus pneumoniae) Explore A0ACD7PU69 Go to UniProtKB: A0ACD7PU69
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	A0ACD7PU69
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 1.34 Å
R-Value Free: 0.186 (Depositor), 0.199 (DCC)
R-Value Work: 0.170 (Depositor), 0.179 (DCC)

Space Group: P 2₁ 2₁ 2₁

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 61.06	α = 90
b = 61.85	β = 90
c = 121.2	γ = 90

Software Package:

Software Name	Purpose
BUSTER	refinement
SHARP	phasing

Structure Validation

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Entry History

Deposition Data

Released Date: 2015-02-25

Deposition Author(s):

Revision History (Full details and data files)

Version 1.0: 2015-02-25
Type: Initial release
Version 1.1: 2024-05-08
Changes: Data collection, Database references, Other