Crystal structure of orotidine 5'-monophosphate decarboxylase from Metallosphaera sedula complexed with inhibitor BMP
Fedorov, A.A., Fedorov, E.V., Desai, B., Gerlt, J.A., Almo, S.C.To be published.
Experimental Data Snapshot
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Orotidine-5'-phosphate decarboxylase | 215 | Metallosphaera sedula DSM 5348 | Mutation(s): 0  Gene Names: Msed_1966 EC: 4.1.1.23 | ||
UniProt | |||||
Find proteins for A4YI54 (Metallosphaera sedula (strain ATCC 51363 / DSM 5348 / JCM 9185 / NBRC 15509 / TH2)) Explore A4YI54  Go to UniProtKB:  A4YI54 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | A4YI54 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 3 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
BMP Query on BMP | C [auth A], E [auth B] | 6-HYDROXYURIDINE-5'-PHOSPHATE C9 H13 N2 O10 P UDOBICLZEKUKCV-YXZULKJRSA-N | |||
SO4 Query on SO4 | D [auth A], I [auth B], J [auth B] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L | |||
ACY Query on ACY | F [auth B], G [auth B], H [auth B] | ACETIC ACID C2 H4 O2 QTBSBXVTEAMEQO-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
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a = 41.396 | α = 90 |
b = 91.57 | β = 98.79 |
c = 50.954 | γ = 90 |
Software Name | Purpose |
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CBASS | data collection |
PHENIX | model building |
PHENIX | refinement |
HKL-2000 | data reduction |
SCALEPACK | data scaling |
PHENIX | phasing |