3SXW | pdb_00003sxw

Crystal Structure of Engineered Protein. Northeast Structural Genomics Consortium Target OR69.

PDB DOI: https://doi.org/10.2210/pdb3SXW/pdb

Classification: ISOMERASE
Organism(s): Pyrococcus furiosus DSM 3638
Mutation(s): Yes

Deposited: 2011-07-15 Released: 2011-08-03
Deposition Author(s): Vorobiev, S., Su, M., Nivon, L., Seetharaman, J., Patel, P., Xiao, R., Maglaqui, M., Ciccosanti, C., Baker, D., Everett, J.K., Nair, R., Acton, T.B., Rost, B., Montelione, G.T., Hunt, J.F., Tong, L., Northeast Structural Genomics Consortium (NESG)

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.80 Å
R-Value Free:
0.216 (Depositor), 0.207 (DCC)
R-Value Work:
0.176 (Depositor)
R-Value Observed:
0.178 (Depositor)

Starting Model: experimental
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wwPDB Validation 3D Report Full Report

Validation slider image for 3SXW

This is version 1.1 of the entry. See complete history.

Literature

Crystal Structure of Engineered Protein. Northeast Structural Genomics Consortium Target OR69.

Vorobiev, S., Su, M., Nivon, L., Seetharaman, J., Patel, P., Xiao, R., Maglaqui, M., Ciccosanti, C., Baker, D., Everett, J.K., Nair, R., Acton, T.B., Rost, B., Montelione, G.T., Hunt, J.F., Tong, L.

To be published.

Macromolecule Content

Total Structure Weight: 22.77 kDa
Atom Count: 1,646
Modeled Residue Count: 188
Deposited Residue Count: 201
Unique protein chains: 1

Macromolecules

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Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Glucose-6-phosphate isomerase	A	201	Pyrococcus furiosus DSM 3638	Mutation(s): 15 Gene Names: pgiA, PF0196 EC: 5.3.1.9
UniProt
Find proteins for P83194 (Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)) Explore P83194 Go to UniProtKB: P83194
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	P83194
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 1.80 Å
R-Value Free: 0.216 (Depositor), 0.207 (DCC)
R-Value Work: 0.176 (Depositor)
R-Value Observed: 0.178 (Depositor)

Space Group: P 3₂ 2 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 59.131	α = 90
b = 59.131	β = 90
c = 137.63	γ = 120

Software Package:

Software Name	Purpose
PHENIX	refinement
PDB_EXTRACT	data extraction
HKL-2000	data collection
HKL-2000	data reduction
HKL-2000	data scaling
BALBES	phasing

Structure Validation

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Entry History

Deposition Data

Released Date: 2011-08-03

Deposition Author(s):

Seetharaman, J.

Montelione, G.T.

Northeast Structural Genomics Consortium (NESG)

Revision History (Full details and data files)

Version 1.0: 2011-08-03
Type: Initial release
Version 1.1: 2023-09-13
Changes: Data collection, Database references, Refinement description

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.