High resolution view of barbiturate recognition by a protein binding site
Oakley, S.H., Vedula, L.S., Xi, J., Liu, R., Eckenhoff, R.G., Loll, P.J.To be published.
Experimental Data Snapshot
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Ferritin light chain | 174 | Equus caballus | Mutation(s): 0  | ||
UniProt | |||||
Find proteins for P02791 (Equus caballus) Explore P02791  Go to UniProtKB:  P02791 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P02791 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 3 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
RAV Query on RAV | J [auth A] | 5-ethyl-5-[(2S)-pentan-2-yl]pyrimidine-2,4,6(1H,3H,5H)-trione C11 H18 N2 O3 WEXRUCMBJFQVBZ-ZETCQYMHSA-N | |||
CD Query on CD | B [auth A] C [auth A] D [auth A] E [auth A] F [auth A] | CADMIUM ION Cd WLZRMCYVCSSEQC-UHFFFAOYSA-N | |||
SO4 Query on SO4 | G [auth A], H [auth A] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 182.48 | α = 90 |
b = 182.48 | β = 90 |
c = 182.48 | γ = 90 |
Software Name | Purpose |
---|---|
d*TREK | data scaling |
PHASER | phasing |
PHENIX | refinement |
PDB_EXTRACT | data extraction |
CrystalClear | data collection |
CrystalClear | data reduction |
CrystalClear | data scaling |