Design of a series of novel three-armed pyrrolidine-based inhibitors for HIV-1 protease
Lindemann, I., Klee, N., Heine, A., Diederich, W.E., Klebe, G.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Protease | 99 | Human immunodeficiency virus type 1 (BRU ISOLATE) | Mutation(s): 3  EC: 3.4.23.16 | ![]() | |
UniProt | |||||
Find proteins for P03367 (Human immunodeficiency virus type 1 group M subtype B (isolate BRU/LAI)) Explore P03367  Go to UniProtKB:  P03367 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P03367 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 3 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
N4I Query on N4I | D [auth B] | 4-({(3S,4S)-4-[(3-hydroxybenzyl)amino]pyrrolidin-3-yl}[4-(trifluoromethyl)benzyl]sulfamoyl)benzamide C26 H27 F3 N4 O4 S ZYWFLXMDPHUHGO-ZEQRLZLVSA-N | |||
DTD Query on DTD | G [auth B] | DITHIANE DIOL C4 H8 O2 S2 YPGMOWHXEQDBBV-IMJSIDKUSA-N | |||
CL Query on CL | C [auth A], E [auth B], F [auth B] | CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 57.9 | α = 90 |
b = 85.98 | β = 90 |
c = 46.19 | γ = 90 |
Software Name | Purpose |
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MAR345dtb | data collection |
PHASER | phasing |
PHENIX | refinement |
HKL-2000 | data reduction |
HKL-2000 | data scaling |