Diheme SoxAX proteins - insights into structure and function of the active site
Kilmartin, J., Maher, M.J., Krusong, K., Hanson, G.R., Bernhardt, P.V., Riley, M., Kappler, U.To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
SoxA | 275 | Ancylobacter novellus | Mutation(s): 0  | ||
UniProt | |||||
Find proteins for D7A6E5 (Ancylobacter novellus (strain ATCC 8093 / DSM 506 / JCM 20403 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIMB 10456)) Explore D7A6E5  Go to UniProtKB:  D7A6E5 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | D7A6E5 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 2 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
SoxX | 208 | Ancylobacter novellus | Mutation(s): 0  | ||
UniProt | |||||
Find proteins for Q7BQR5 (Ancylobacter novellus) Explore Q7BQR5  Go to UniProtKB:  Q7BQR5 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q7BQR5 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 2 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
HEC Query on HEC | G [auth A] H [auth B] J [auth C] K [auth D] L [auth E] | HEME C C34 H34 Fe N4 O4 HXQIYSLZKNYNMH-LJNAALQVSA-N | |||
SO4 Query on SO4 | I [auth B] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L |
Modified Residues 1 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Type | Formula | 2D Diagram | Parent |
CSS Query on CSS | A, C, E | L-PEPTIDE LINKING | C3 H7 N O2 S2 | CYS |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 73.172 | α = 110.02 |
b = 74.629 | β = 108.08 |
c = 74.295 | γ = 108.54 |
Software Name | Purpose |
---|---|
SHARP | phasing |
REFMAC | refinement |
DENZO | data reduction |
SCALEPACK | data scaling |