3JTE | pdb_00003jte

Crystal structure of response regulator receiver domain Protein from clostridium thermocellum

• PDB DOI: https://doi.org/10.2210/pdb3JTE/pdb

• Classification: PROTEIN BINDING
• Organism(s): Acetivibrio thermocellus ATCC 27405
• Expression System: Escherichia coli
• Mutation(s): No 


• Deposited: 2009-09-11 Released: 2009-09-22 
• Deposition Author(s): Fedorov, A.A., Fedorov, E.V., Toro, R., Sauder, J.M., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 1.90 Å
• R-Value Free: 
  0.248 (Depositor), 0.250 (DCC) 
• R-Value Work: 
  0.226 (Depositor), 0.227 (DCC) 
• R-Value Observed: 
  0.226 (Depositor) 

Literature

Crystal structure of response regulator receiver domain Protein from clostridium thermocellum

Fedorov, A.A., Fedorov, E.V., Toro, R., Sauder, J.M., Burley, S.K., Almo, S.C.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors and generated by PISA (software)

Macromolecule Content 

• Total Structure Weight: 16.09 kDa 
• Atom Count: 1,036 
• Modeled Residue Count: 126 
• Deposited Residue Count: 143 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Response regulator receiver protein	A	143	Acetivibrio thermocellus ATCC 27405	Mutation(s): 0  Gene Names: Cthe_0583
UniProt
Find proteins for A3DCZ0 (Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372)) Explore A3DCZ0  Go to UniProtKB:  A3DCZ0

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 1.90 Å
• R-Value Free:  0.248 (Depositor), 0.250 (DCC) 
• R-Value Work:  0.226 (Depositor), 0.227 (DCC) 
• R-Value Observed: 0.226 (Depositor) 

Space Group: I 4 2 2

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 98.896	α = 90
b = 98.896	β = 90
c = 86.7	γ = 90

Software Package:

Software Name	Purpose
APEX	data collection
BALBES	phasing
CNS	refinement
DENZO	data reduction
SCALEPACK	data scaling

Structure Validation

Entry History 

Deposition Data

• Released Date: 2009-09-22 
Deposition Author(s): Fedorov, A.A., Fedorov, E.V., Toro, R., Sauder, J.M., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)

Revision History  

• Version 1.0: 2009-09-22
  Type: Initial release
  
• Version 1.1: 2011-07-13
  Changes: Version format compliance
• Version 1.2: 2012-10-24
  Changes: Structure summary
• Version 1.3: 2018-11-21
  Changes: Data collection, Structure summary
• Version 1.4: 2021-02-10
  Changes: Database references, Structure summary
• Version 1.5: 2024-02-21
  Changes: Data collection, Database references