Crystal structure of Ribokinase in Complex with ATP and glycerol in the active site from Klebsiella pneumoniae
Satyanarayana, L., Burley, S.K., Swaminathan, S.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Carbohydrate kinase | 299 | Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | Mutation(s): 0  Gene Names: KPN78578_16990, KPN78578_16990/5340552, KPN_01729 EC: 2.7.1.15 | ![]() | |
UniProt | |||||
Find proteins for A6T989 (Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578)) Explore A6T989  Go to UniProtKB:  A6T989 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | A6T989 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 2 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
ATP Query on ATP | E [auth A], F [auth B], G [auth C], I [auth D] | ADENOSINE-5'-TRIPHOSPHATE C10 H16 N5 O13 P3 ZKHQWZAMYRWXGA-KQYNXXCUSA-N | |||
GOL Query on GOL | H [auth C], J [auth D] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N |
Modified Residues 1 Unique | |||||
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ID | Chains | Type | Formula | 2D Diagram | Parent |
MSE Query on MSE | A, B, C, D | L-PEPTIDE LINKING | C5 H11 N O2 Se | MET |
Length ( Å ) | Angle ( ˚ ) |
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a = 54.332 | α = 90 |
b = 106.352 | β = 99.51 |
c = 122.056 | γ = 90 |
Software Name | Purpose |
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CBASS | data collection |
MOLREP | phasing |
CNS | refinement |
DENZO | data reduction |
HKL-2000 | data scaling |