3IHS | pdb_00003ihs

Crystal Structure of a Phosphocarrier Protein HPr from Bacillus anthracis str. Ames

PDB DOI: https://doi.org/10.2210/pdb3IHS/pdb

Classification: TRANSPORT PROTEIN
Organism(s): Bacillus anthracis str. Ames
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2009-07-30 Released: 2009-08-11
Deposition Author(s): Brunzelle, J.S., Anderson, S.M., Skarina, T., Onopriyenko, O., Savchenko, A., Anderson, W.F., Center for Structural Genomics of Infectious Diseases (CSGID)

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.15 Å
R-Value Free:
0.185 (Depositor), 0.184 (DCC)
R-Value Work:
0.156 (Depositor), 0.158 (DCC)
R-Value Observed:
0.157 (Depositor)

wwPDB Validation 3D Report Full Report

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This is version 1.2 of the entry. See complete history.

Literature

Crystal Structure of a Phosphocarrier Protein HPr from Bacillus anthracis str. Ames

Brunzelle, J.S., Anderson, S.M., Wawrzak, Z., Skarina, T., Onopriyenko, O., Savchenko, A., Anderson, W.F., Center for Structural Genomics of Infectious Diseases (CSGID)

To be published.

Macromolecule Content

Total Structure Weight: 23.57 kDa
Atom Count: 1,562
Modeled Residue Count: 169
Deposited Residue Count: 212
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Phosphocarrier protein HPr	A, B	106	Bacillus anthracis str. Ames	Mutation(s): 0 Gene Names: BAS5001, BA_5381, GBAA5381, GBAA_5381, ptsH-2, ptsH2
UniProt
Find proteins for A0A6L7HPZ9 (Bacillus anthracis) Explore A0A6L7HPZ9 Go to UniProtKB: A0A6L7HPZ9
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	A0A6L7HPZ9
Sequence Annotations Expand
Reference Sequence

Small Molecules

Modified Residues 1 Unique
ID	Chains	Type	Formula	2D Diagram	Parent
MSE Query on MSE	A, B	L-PEPTIDE LINKING	C₅ H₁₁ N O₂ Se		MET

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 1.15 Å
R-Value Free: 0.185 (Depositor), 0.184 (DCC)
R-Value Work: 0.156 (Depositor), 0.158 (DCC)
R-Value Observed: 0.157 (Depositor)

Diffraction Data:

Space Group: P 3₁ 2 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 40.84	α = 90
b = 40.84	β = 90
c = 139.37	γ = 120

Software Package:

Software Name	Purpose
BLU-MAX	data collection
PHENIX	model building
REFMAC	refinement
XDS	data reduction
XSCALE	data scaling
PHENIX	phasing

Structure Validation

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Entry History

Deposition Data

Released Date: 2009-08-11

Deposition Author(s):

Brunzelle, J.S.

Onopriyenko, O.

Center for Structural Genomics of Infectious Diseases (CSGID)

Revision History (Full details and data files)

Version 1.0: 2009-08-11
Type: Initial release
Version 1.1: 2011-07-13
Changes: Version format compliance
Version 1.2: 2024-11-06
Changes: Data collection, Database references, Derived calculations, Structure summary

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.