Crystal structure of Putative calcium/calmodulin-dependent protein kinase type II association domain (YP_315894.1) from THIOBACILLUS DENITRIFICANS ATCC 25259 at 2.00 A resolution
Joint Center for Structural Genomics (JCSG)To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Putative calcium/calmodulin-dependent protein kinase type II association domain | 144 | Thiobacillus denitrificans ATCC 25259 | Mutation(s): 0  Gene Names: Tbd_2136, YP_315894.1 | ![]() | |
UniProt | |||||
Find proteins for Q3SH04 (Thiobacillus denitrificans (strain ATCC 25259)) Explore Q3SH04  Go to UniProtKB:  Q3SH04 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q3SH04 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 2 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
PG4 Query on PG4 | D [auth A] E [auth A] F [auth A] H [auth B] I [auth B] | TETRAETHYLENE GLYCOL C8 H18 O5 UWHCKJMYHZGTIT-UHFFFAOYSA-N | |||
UNL Query on UNL | C [auth A], G [auth B] | Unknown ligand UWHCKJMYHZGTIT-UHFFFAOYSA-N |
Modified Residues 1 Unique | |||||
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ID | Chains | Type | Formula | 2D Diagram | Parent |
MSE Query on MSE | A, B | L-PEPTIDE LINKING | C5 H11 N O2 Se | MET |
Length ( Å ) | Angle ( ˚ ) |
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a = 41.445 | α = 90 |
b = 89.655 | β = 90 |
c = 90.259 | γ = 90 |
Software Name | Purpose |
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REFMAC | refinement |
PHENIX | refinement |
SHELX | phasing |
MolProbity | model building |
XSCALE | data scaling |
PDB_EXTRACT | data extraction |
XDS | data reduction |
SHELXD | phasing |
autoSHARP | phasing |