3EP0

Methyltransferase domain of human PR domain-containing protein 12


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.10 Å
  • R-Value Free: 0.286 
  • R-Value Work: 0.257 
  • R-Value Observed: 0.259 

Starting Model: experimental
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wwPDB Validation   3D Report Full Report


This is version 1.2 of the entry. See complete history


Literature

The crystal structure of methyltransferase domain of human PR Domain-containing protein 12.

Zeng, H.Amaya, M.F.Loppnau, P.Min, J.Plotnikov, A.N.Wu, H.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
PR domain zinc finger protein 12
A, B
170Homo sapiensMutation(s): 0 
Gene Names: PRDM12PFM9
UniProt & NIH Common Fund Data Resources
Find proteins for Q9H4Q4 (Homo sapiens)
Explore Q9H4Q4 
Go to UniProtKB:  Q9H4Q4
PHAROS:  Q9H4Q4
GTEx:  ENSG00000130711 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ9H4Q4
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.10 Å
  • R-Value Free: 0.286 
  • R-Value Work: 0.257 
  • R-Value Observed: 0.259 
  • Space Group: C 1 2 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 138.882α = 90
b = 34.358β = 131.09
c = 103.739γ = 90
Software Package:
Software NamePurpose
REFMACrefinement
PDB_EXTRACTdata extraction

Structure Validation

View Full Validation Report



Entry History 

Revision History  (Full details and data files)

  • Version 1.0: 2008-11-04
    Type: Initial release
  • Version 1.1: 2011-07-13
    Changes: Version format compliance
  • Version 1.2: 2023-09-06
    Changes: Data collection, Database references, Refinement description