Structure of transcriptional regulator (GntR family member) from Pseudomonas syringae pv. tomato str. DC3000.
Nocek, B., Sather, A., Gu, M., Joachimiak, A.To be published.
Experimental Data Snapshot
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Transcriptional regulator, GntR family | 237 | Pseudomonas syringae pv. tomato str. DC3000 | Mutation(s): 0  Gene Names: PSPTO5454 | ||
UniProt | |||||
Find proteins for Q19AK4 (Pseudomonas syringae pv. syringae) Explore Q19AK4  Go to UniProtKB:  Q19AK4 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q19AK4 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 1 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
NI Query on NI | C [auth A], D [auth B] | NICKEL (II) ION Ni VEQPNABPJHWNSG-UHFFFAOYSA-N |
Modified Residues 1 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Type | Formula | 2D Diagram | Parent |
MSE Query on MSE | A, B | L-PEPTIDE LINKING | C5 H11 N O2 Se | MET |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 55.954 | α = 90 |
b = 132.768 | β = 90 |
c = 170.461 | γ = 90 |
Software Name | Purpose |
---|---|
REFMAC | refinement |
PDB_EXTRACT | data extraction |
SBC-Collect | data collection |
HKL-3000 | data reduction |
HKL-3000 | data scaling |
HKL-3000 | phasing |
SHELXD | phasing |
Coot | model building |
MLPHARE | phasing |
PHENIX | phasing |
REFMAC | phasing |