393D | pdb_0000393d

CRYSTAL STRUCTURE OF TWO SELF-COMPLEMENTARY CHIMERIC DECAMER D(CCGG)R(C)D(GCCGG) AND D(CCGG)R(CG)D(CCGG)

Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.00 Å
  • R-Value Work: 
    0.181 (Depositor) 

wwPDB Validation 3D Report Full Report

Validation slider image for 393D

This is version 1.6 of the entry. See complete history. 

Literature

Crystal Structure of Two Self-Complementary Chimeric Decamer d(CCGG)r(C)d(GCCGG) and d(CCGG)r(CG)d(CCGG)

Ban, C., Ramakrishnan, B., Sundaralingam, M.

To be published.

Macromolecule Content 

  • Total Structure Weight: 6.13 kDa 
  • Atom Count: 476 
  • Modeled Residue Count: 20 
  • Deposited Residue Count: 20 
  • Unique hybrid chains: 1

Macromolecules

Find similar nucleic acids by:  Sequence
Entity ID: 1
MoleculeChains LengthOrganismImage
DNA/RNA (5'-D(*CP*CP*GP*GP)-R(*CP)-D(*GP*CP*CP*GP*G)-3')
A, B
10synthetic construct
Sequence Annotations
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Reference Sequence

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.00 Å
  • R-Value Work:  0.181 (Depositor) 
Space Group: P 21 21 21
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 24.52α = 90
b = 44.85β = 90
c = 47.58γ = 90
Software Package:
Software NamePurpose
XENGENdata collection
XENGENdata reduction
X-PLORrefinement
XENGENdata scaling

Structure Validation

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Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 1998-05-01
    Type: Initial release
  • Version 1.1: 2008-05-22
    Changes: Version format compliance
  • Version 1.2: 2011-07-13
    Changes: Version format compliance
  • Version 1.3: 2016-12-14
    Changes: Structure summary
  • Version 1.4: 2017-02-01
    Changes: Database references
  • Version 1.5: 2017-05-03
    Changes: Source and taxonomy, Structure summary
  • Version 1.6: 2024-02-21
    Changes: Data collection, Database references