Ribosome collisions trigger tmRNA-mediated rescue through mRNA disengagement
Metelev, M., Borg, A., Akbar, S., Larsson, D.S.D., Seefeldt, A.C., Selmer, M., Johansson, M.To be published.
Experimental Data Snapshot
Starting Models: experimental, in silico
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wwPDB Validation 3D Report Full Report
Macromolecule Content 
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Large ribosomal subunit protein bL33 | A [auth 0] | 55 | Escherichia coli | Mutation(s): 0  | ![]() |
UniProt | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P0A7N9 | ||||
Sequence AnnotationsExpand | |||||
Reference Sequence | |||||
Entity ID: 2 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Large ribosomal subunit protein bL34 | B [auth 1] | 46 | Escherichia coli | Mutation(s): 0  | ![]() |
UniProt | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P0A7P5 | ||||
Sequence AnnotationsExpand | |||||
Reference Sequence | |||||
Entity ID: 3 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Large ribosomal subunit protein bL35 | C [auth 2] | 65 | Escherichia coli | Mutation(s): 0  | ![]() |
UniProt | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P0A7Q1 | ||||
Sequence AnnotationsExpand | |||||
Reference Sequence | |||||
Entity ID: 4 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Large ribosomal subunit protein bL36A | D [auth 3] | 38 | Escherichia coli | Mutation(s): 0  | ![]() |
UniProt | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P0A7Q6 | ||||
Sequence AnnotationsExpand | |||||
Reference Sequence | |||||
Entity ID: 5 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Large ribosomal subunit protein bL31 | E [auth 4] | 70 | Escherichia coli | Mutation(s): 0  | ![]() |
UniProt | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P0A7M9 | ||||
Sequence AnnotationsExpand | |||||
Reference Sequence | |||||
Entity ID: 7 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Small ribosomal subunit protein uS2 | G [auth B] | 241 | Escherichia coli | Mutation(s): 0  | ![]() |
UniProt | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P0A7V0 | ||||
Sequence AnnotationsExpand | |||||
Reference Sequence | |||||
Entity ID: 8 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Small ribosomal subunit protein uS3 | H [auth C] | 233 | Escherichia coli | Mutation(s): 0  | ![]() |
UniProt | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P0A7V3 | ||||
Sequence AnnotationsExpand | |||||
Reference Sequence | |||||
Entity ID: 9 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Small ribosomal subunit protein uS4 | I [auth D] | 206 | Escherichia coli | Mutation(s): 0  | ![]() |
UniProt | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P0A7V8 | ||||
Sequence AnnotationsExpand | |||||
Reference Sequence | |||||
Entity ID: 10 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Small ribosomal subunit protein uS5 | J [auth E] | 167 | Escherichia coli | Mutation(s): 0  | ![]() |
UniProt | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P0A7W1 | ||||
Sequence AnnotationsExpand | |||||
Reference Sequence | |||||
Entity ID: 11 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Small ribosomal subunit protein bS6, fully modified isoform | K [auth F] | 135 | Escherichia coli | Mutation(s): 0  | ![]() |
UniProt | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P02358 | ||||
Sequence AnnotationsExpand | |||||
Reference Sequence | |||||
Entity ID: 12 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Small ribosomal subunit protein uS7 | L [auth G] | 179 | Escherichia coli | Mutation(s): 0  | ![]() |
UniProt | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P02359 | ||||
Sequence AnnotationsExpand | |||||
Reference Sequence | |||||
Entity ID: 13 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Small ribosomal subunit protein uS8 | M [auth H] | 130 | Escherichia coli | Mutation(s): 0  | ![]() |
UniProt | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P0A7W7 | ||||
Sequence AnnotationsExpand | |||||
Reference Sequence | |||||
Entity ID: 14 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Small ribosomal subunit protein uS9 | N [auth I] | 130 | Escherichia coli | Mutation(s): 0  | ![]() |
UniProt | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P0A7X3 | ||||
Sequence AnnotationsExpand | |||||
Reference Sequence | |||||
Entity ID: 15 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Small ribosomal subunit protein uS10 | O [auth J] | 103 | Escherichia coli | Mutation(s): 0  | ![]() |
UniProt | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P0A7R5 | ||||
Sequence AnnotationsExpand | |||||
Reference Sequence | |||||
Entity ID: 16 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Small ribosomal subunit protein uS11 | P [auth K] | 129 | Escherichia coli | Mutation(s): 0  | ![]() |
UniProt | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P0A7R9 | ||||
Sequence AnnotationsExpand | |||||
Reference Sequence | |||||
Entity ID: 17 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Small ribosomal subunit protein uS12 | Q [auth L] | 124 | Escherichia coli | Mutation(s): 0  | ![]() |
UniProt | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P0A7S3 | ||||
Sequence AnnotationsExpand | |||||
Reference Sequence | |||||
Entity ID: 18 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Small ribosomal subunit protein uS13 | R [auth M] | 118 | Escherichia coli | Mutation(s): 0  | ![]() |
UniProt | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P0A7S9 | ||||
Sequence AnnotationsExpand | |||||
Reference Sequence | |||||
Entity ID: 19 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Small ribosomal subunit protein uS14 | S [auth N] | 101 | Escherichia coli | Mutation(s): 0  | ![]() |
UniProt | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P0AG59 | ||||
Sequence AnnotationsExpand | |||||
Reference Sequence | |||||
Entity ID: 20 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Small ribosomal subunit protein uS15 | T [auth O] | 89 | Escherichia coli | Mutation(s): 0  | ![]() |
UniProt | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P0ADZ4 | ||||
Sequence AnnotationsExpand | |||||
Reference Sequence | |||||
Entity ID: 21 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Small ribosomal subunit protein bS16 | U [auth P] | 82 | Escherichia coli | Mutation(s): 0  | ![]() |
UniProt | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P0A7T3 | ||||
Sequence AnnotationsExpand | |||||
Reference Sequence | |||||
Entity ID: 22 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Small ribosomal subunit protein uS17 | V [auth Q] | 84 | Escherichia coli | Mutation(s): 0  | ![]() |
UniProt | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P0AG63 | ||||
Sequence AnnotationsExpand | |||||
Reference Sequence | |||||
Entity ID: 23 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Small ribosomal subunit protein bS18 | W [auth R] | 75 | Escherichia coli | Mutation(s): 0  | ![]() |
UniProt | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P0A7T7 | ||||
Sequence AnnotationsExpand | |||||
Reference Sequence | |||||
Entity ID: 24 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Small ribosomal subunit protein uS19 | X [auth S] | 92 | Escherichia coli | Mutation(s): 0  | ![]() |
UniProt | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P0A7U3 | ||||
Sequence AnnotationsExpand | |||||
Reference Sequence | |||||
Entity ID: 25 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Small ribosomal subunit protein bS20 | Y [auth T] | 87 | Escherichia coli | Mutation(s): 0  | ![]() |
UniProt | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P0A7U7 | ||||
Sequence AnnotationsExpand | |||||
Reference Sequence | |||||
Entity ID: 26 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Small ribosomal subunit protein bS21 | Z [auth U] | 71 | Escherichia coli | Mutation(s): 0  | ![]() |
UniProt | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P68679 | ||||
Sequence AnnotationsExpand | |||||
Reference Sequence | |||||
Entity ID: 27 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Heat shock protein 15 | AA [auth V] | 142 | Escherichia coli | Mutation(s): 0  Gene Names: hslR, yrfH, b3400, JW3363 | ![]() |
UniProt | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P0ACG8 | ||||
Sequence AnnotationsExpand | |||||
Reference Sequence | |||||
Entity ID: 32 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Large ribosomal subunit protein uL2 | FA [auth c] | 273 | Escherichia coli | Mutation(s): 0  | ![]() |
UniProt | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P60422 | ||||
Sequence AnnotationsExpand | |||||
Reference Sequence | |||||
Entity ID: 33 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Large ribosomal subunit protein uL3 | GA [auth d] | 209 | Escherichia coli | Mutation(s): 0  | ![]() |
UniProt | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P60438 | ||||
Sequence AnnotationsExpand | |||||
Reference Sequence | |||||
Entity ID: 34 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Large ribosomal subunit protein uL4 | HA [auth e] | 201 | Escherichia coli | Mutation(s): 0  | ![]() |
UniProt | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P60723 | ||||
Sequence AnnotationsExpand | |||||
Reference Sequence | |||||
Entity ID: 35 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Large ribosomal subunit protein uL5 | IA [auth f] | 179 | Escherichia coli | Mutation(s): 0  | ![]() |
UniProt | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P62399 | ||||
Sequence AnnotationsExpand | |||||
Reference Sequence | |||||
Entity ID: 36 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Large ribosomal subunit protein uL6 | JA [auth g] | 177 | Escherichia coli | Mutation(s): 0  | ![]() |
UniProt | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P0AG55 | ||||
Sequence AnnotationsExpand | |||||
Reference Sequence | |||||
Entity ID: 37 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Large ribosomal subunit protein bL9 | KA [auth h] | 149 | Escherichia coli | Mutation(s): 0  | ![]() |
UniProt | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P0A7R1 | ||||
Sequence AnnotationsExpand | |||||
Reference Sequence | |||||
Entity ID: 38 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Large ribosomal subunit protein uL13 | LA [auth i] | 142 | Escherichia coli | Mutation(s): 0  | ![]() |
UniProt | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P0AA10 | ||||
Sequence AnnotationsExpand | |||||
Reference Sequence | |||||
Entity ID: 39 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Large ribosomal subunit protein uL14 | MA [auth j] | 123 | Escherichia coli | Mutation(s): 0  | ![]() |
UniProt | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P0ADY3 | ||||
Sequence AnnotationsExpand | |||||
Reference Sequence | |||||
Entity ID: 40 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Large ribosomal subunit protein uL15 | NA [auth k] | 144 | Escherichia coli | Mutation(s): 0  | ![]() |
UniProt | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P02413 | ||||
Sequence AnnotationsExpand | |||||
Reference Sequence | |||||
Entity ID: 41 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Large ribosomal subunit protein uL16 | OA [auth l] | 136 | Escherichia coli | Mutation(s): 0  | ![]() |
UniProt | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P0ADY7 | ||||
Sequence AnnotationsExpand | |||||
Reference Sequence | |||||
Entity ID: 42 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Large ribosomal subunit protein bL17 | PA [auth m] | 127 | Escherichia coli | Mutation(s): 0  | ![]() |
UniProt | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P0AG44 | ||||
Sequence AnnotationsExpand | |||||
Reference Sequence | |||||
Entity ID: 43 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Large ribosomal subunit protein uL18 | QA [auth n] | 117 | Escherichia coli | Mutation(s): 0  | ![]() |
UniProt | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P0C018 | ||||
Sequence AnnotationsExpand | |||||
Reference Sequence | |||||
Entity ID: 44 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Large ribosomal subunit protein bL19 | RA [auth o] | 115 | Escherichia coli | Mutation(s): 0  | ![]() |
UniProt | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P0A7K6 | ||||
Sequence AnnotationsExpand | |||||
Reference Sequence | |||||
Entity ID: 45 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Large ribosomal subunit protein bL20 | SA [auth p] | 118 | Escherichia coli | Mutation(s): 0  | ![]() |
UniProt | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P0A7L3 | ||||
Sequence AnnotationsExpand | |||||
Reference Sequence | |||||
Entity ID: 46 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Large ribosomal subunit protein bL21 | TA [auth q] | 103 | Escherichia coli | Mutation(s): 0  | ![]() |
UniProt | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P0AG48 | ||||
Sequence AnnotationsExpand | |||||
Reference Sequence | |||||
Entity ID: 47 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Large ribosomal subunit protein uL22 | UA [auth r] | 110 | Escherichia coli | Mutation(s): 0  | ![]() |
UniProt | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P61175 | ||||
Sequence AnnotationsExpand | |||||
Reference Sequence | |||||
Entity ID: 48 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Large ribosomal subunit protein uL23 | VA [auth s] | 100 | Escherichia coli | Mutation(s): 0  | ![]() |
UniProt | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P0ADZ0 | ||||
Sequence AnnotationsExpand | |||||
Reference Sequence | |||||
Entity ID: 49 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Large ribosomal subunit protein uL24 | WA [auth t] | 104 | Escherichia coli | Mutation(s): 0  | ![]() |
UniProt | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P60624 | ||||
Sequence AnnotationsExpand | |||||
Reference Sequence | |||||
Entity ID: 50 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Large ribosomal subunit protein bL25 | XA [auth u] | 94 | Escherichia coli | Mutation(s): 0  | ![]() |
UniProt | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P68919 | ||||
Sequence AnnotationsExpand | |||||
Reference Sequence | |||||
Entity ID: 51 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Large ribosomal subunit protein bL27 | YA [auth v] | 85 | Escherichia coli | Mutation(s): 0  | ![]() |
UniProt | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P0A7L8 | ||||
Sequence AnnotationsExpand | |||||
Reference Sequence | |||||
Entity ID: 52 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Large ribosomal subunit protein bL28 | ZA [auth w] | 78 | Escherichia coli | Mutation(s): 0  | ![]() |
UniProt | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P0A7M2 | ||||
Sequence AnnotationsExpand | |||||
Reference Sequence | |||||
Entity ID: 53 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Large ribosomal subunit protein uL29 | AB [auth x] | 63 | Escherichia coli | Mutation(s): 0  | ![]() |
UniProt | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P0A7M6 | ||||
Sequence AnnotationsExpand | |||||
Reference Sequence | |||||
Entity ID: 54 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Large ribosomal subunit protein uL30 | BB [auth y] | 59 | Escherichia coli | Mutation(s): 0  | ![]() |
UniProt | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P0AG51 | ||||
Sequence AnnotationsExpand | |||||
Reference Sequence | |||||
Entity ID: 55 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Large ribosomal subunit protein bL32 | CB [auth z] | 57 | Escherichia coli | Mutation(s): 0  | ![]() |
UniProt | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P0A7N4 | ||||
Sequence AnnotationsExpand | |||||
Reference Sequence | |||||
Entity ID: 6 | ||||
| Molecule | Chains | Length | Organism | Image |
|---|---|---|---|---|
| 16S rRNA | F [auth A] | 1,542 | Escherichia coli | ![]() |
Sequence AnnotationsExpand | ||||
Reference Sequence | ||||
Entity ID: 28 | ||||
| Molecule | Chains | Length | Organism | Image |
|---|---|---|---|---|
| mRNA | BA [auth X] | 3 | Escherichia coli | ![]() |
Sequence AnnotationsExpand | ||||
Reference Sequence | ||||
Entity ID: 29 | ||||
| Molecule | Chains | Length | Organism | Image |
|---|---|---|---|---|
| tRNA Asp | CA [auth Z] | 77 | Escherichia coli | ![]() |
Sequence AnnotationsExpand | ||||
Reference Sequence | ||||
Entity ID: 30 | ||||
| Molecule | Chains | Length | Organism | Image |
|---|---|---|---|---|
| 23S rRNA | DA [auth a] | 2,904 | Escherichia coli | ![]() |
Sequence AnnotationsExpand | ||||
Reference Sequence | ||||
Entity ID: 31 | ||||
| Molecule | Chains | Length | Organism | Image |
|---|---|---|---|---|
| 5S rRNA | EA [auth b] | 120 | Escherichia coli | ![]() |
Sequence AnnotationsExpand | ||||
Reference Sequence | ||||
| Ligands 3 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| ASP Download:Ideal Coordinates CCD File | ZD [auth Z] | ASPARTIC ACID C4 H7 N O4 CKLJMWTZIZZHCS-REOHCLBHSA-N | |||
| ZN Download:Ideal Coordinates CCD File | DB [auth 3], EB [auth 4] | ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N | |||
| MG Download:Ideal Coordinates CCD File | AC [auth A] AD [auth A] AE [auth a] AF [auth a] AG [auth a] | MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N | |||
| Modified Residues 4 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| D2T Query on D2T | Q [auth L] | L-PEPTIDE LINKING | C5 H9 N O4 S | ASP | |
| MEQ Query on MEQ | GA [auth d] | L-PEPTIDE LINKING | C6 H12 N2 O3 | GLN | |
| 4D4 Query on 4D4 | OA [auth l] | L-PEPTIDE LINKING | C6 H14 N4 O3 | ARG | |
| MS6 Query on MS6 | OA [auth l] | L-PEPTIDE LINKING | C5 H11 N O S2 | MET | |
| Task | Software Package | Version |
|---|---|---|
| RECONSTRUCTION | cryoSPARC | 4.7.1 |
| MODEL REFINEMENT | Servalcat | 0.4.77 |
| Funding Organization | Location | Grant Number |
|---|---|---|
| Swedish Research Council | Sweden | 2022-04511 |