Substrate Recognition in Tunnel of Family 7 Alginate Lyase from Sphingomonas sp. A1
Ogura, K., Yamasaki, M., Mikami, B., Hashimoto, W., Murata, K.To be published.
Experimental Data Snapshot
Starting Model: experimental
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wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Alginate lyase | 236 | Sphingomonas sp. A1 | Mutation(s): 1  Gene Names: aly EC: 4.2.2.3 | ![]() | |
UniProt | |||||
Find proteins for Q75WP3 (Sphingomonas sp. A1) Explore Q75WP3  Go to UniProtKB:  Q75WP3 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q75WP3 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 1 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
GOL Query on GOL | C [auth A] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 34.73 | α = 90 |
b = 68.102 | β = 90 |
c = 79.95 | γ = 90 |
Software Name | Purpose |
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REFMAC | refinement |
HKL-2000 | data collection |
HKL-2000 | data reduction |
HKL-2000 | data scaling |
CNS | phasing |