2YUP | pdb_00002yup

Solution structure of the second SH3 domain of human Vinexin

• PDB DOI: https://doi.org/10.2210/pdb2YUP/pdb
• BMRB: 10195

• Classification: CELL ADHESION
• Organism(s): Homo sapiens
• Mutation(s): No 


• Deposited: 2007-04-06 Released: 2007-10-09 
• Deposition Author(s): Abe, H., Tochio, N., Miyamoto, K., Saito, K., Sasagawa, A., Koshiba, S., Inoue, M., Kigawa, T., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

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Experimental Data Snapshot

• Method: SOLUTION NMR
• Conformers Calculated: 100 
• Conformers Submitted: 20 
• Selection Criteria: structures with the least restraint violations, target function 

Literature

Solution structure of the second SH3 domain of human Vinexin

Abe, H., Tochio, N., Miyamoto, K., Saito, K., Sasagawa, A., Koshiba, S., Inoue, M., Kigawa, T., Yokoyama, S.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors.

Macromolecule Content 

• Total Structure Weight: 9.93 kDa 
• Atom Count: 698 
• Modeled Residue Count: 90 
• Deposited Residue Count: 90 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Vinexin	A	90	Homo sapiens	Mutation(s): 0  Gene Names: SORBS3
UniProt & NIH Common Fund Data Resources
Find proteins for O60504 (Homo sapiens) Explore O60504  Go to UniProtKB:  O60504
PHAROS:  O60504 GTEx:  ENSG00000120896

Experimental Data & Validation

Experimental Data

• Method: SOLUTION NMR
• Conformers Calculated: 100 
• Conformers Submitted: 20 
• Selection Criteria: structures with the least restraint violations, target function 

Structure Validation

Entry History 

Deposition Data

• Released Date: 2007-10-09 
Deposition Author(s): Abe, H., Tochio, N., Miyamoto, K., Saito, K., Sasagawa, A., Koshiba, S., Inoue, M., Kigawa, T., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

Revision History  

• Version 1.0: 2007-10-09
  Type: Initial release
  
• Version 1.1: 2011-07-13
  Changes: Version format compliance
• Version 1.2: 2022-03-16
  Changes: Data collection, Database references, Derived calculations
• Version 1.3: 2024-05-29
  Changes: Data collection