2YTW | pdb_00002ytw

Solution structure of the PDZ-domain of human protease HTRA 1 precursor

PDB DOI: https://doi.org/10.2210/pdb2YTW/pdb

Classification: STRUCTURAL PROTEIN
Organism(s): Homo sapiens
Mutation(s): No

Deposited: 2007-04-05 Released: 2008-04-08
Deposition Author(s): Goroncy, A.K., Saito, K., Koshiba, S., Watanabe, S., Harada, T., Kigawa, T., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

Experimental Data Snapshot

Method: SOLUTION NMR
Conformers Calculated: 100
Conformers Submitted: 20
Selection Criteria: structures with the least restraint violations

wwPDB Validation 3D Report Full Report

Validation slider image for 2YTW

This is version 1.3 of the entry. See complete history.

Literature

Solution structure of the PDZ-domain of human protease HTRA 1 precursor

Goroncy, A.K., Saito, K., Koshiba, S., Watanabe, S., Harada, T., Kigawa, T., Yokoyama, S.

To be published.

Macromolecule Content

Total Structure Weight: 12.77 kDa
Atom Count: 891
Modeled Residue Count: 118
Deposited Residue Count: 118
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Serine protease HTRA1	A	118	Homo sapiens	Mutation(s): 0 Gene Names: HTRA1 EC: 3.4.21
UniProt & NIH Common Fund Data Resources
Find proteins for Q92743 (Homo sapiens) Explore Q92743 Go to UniProtKB: Q92743
PHAROS: Q92743 GTEx: ENSG00000166033
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q92743
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: SOLUTION NMR
Conformers Calculated: 100
Conformers Submitted: 20
Selection Criteria: structures with the least restraint violations

Structure Validation

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Entry History

Deposition Data

Released Date: 2008-04-08

Deposition Author(s):

RIKEN Structural Genomics/Proteomics Initiative (RSGI)

Revision History (Full details and data files)

Version 1.0: 2008-04-08
Type: Initial release
Version 1.1: 2011-07-13
Changes: Version format compliance
Version 1.2: 2022-03-16
Changes: Data collection, Database references, Derived calculations
Version 1.3: 2024-05-29
Changes: Data collection

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.