2YT9

Solution structure of C2H2 type Zinc finger domain 345 in Zinc finger protein 278

• PDB DOI: https://doi.org/10.2210/pdb2YT9/pdb

• Classification: TRANSCRIPTION
• Organism(s): Homo sapiens
• Mutation(s): No 


• Deposited: 2007-04-05 Released: 2007-10-09 
• Deposition Author(s): Kasahara, N., Tsuda, K., Muto, Y., Inoue, M., Kigawa, T., Terada, T., Shirouzu, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

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Experimental Data Snapshot

• Method: SOLUTION NMR
• Conformers Calculated: 100 
• Conformers Submitted: 20 
• Selection Criteria: structures with the least restraint violations, structures with the lowest energy, target function 

Literature

Solution structure of C2H2 type Zinc finger domain 345 in Zinc finger protein 278

Kasahara, N., Tsuda, K., Muto, Y., Inoue, M., Kigawa, T., Terada, T., Shirouzu, M., Yokoyama, S.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors.

Macromolecule Content

• Total Structure Weight: 10.61 kDa 
• Atom Count: 729 
• Modelled Residue Count: 95 
• Deposited Residue Count: 95 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
zinc finger-containing protein 1	A	95	Homo sapiens	Mutation(s): 0  Gene Names: PATZ, RIAZ, ZBTB19, ZNF278, ZSG
UniProt & NIH Common Fund Data Resources
Find proteins for Q9HBE1 (Homo sapiens) Explore Q9HBE1  Go to UniProtKB:  Q9HBE1
PHAROS:  Q9HBE1 GTEx:  ENSG00000100105

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram
ZN	B [auth A], C [auth A], D [auth A]	ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N

Experimental Data & Validation

Experimental Data

• Method: SOLUTION NMR
• Conformers Calculated: 100 
• Conformers Submitted: 20 
• Selection Criteria: structures with the least restraint violations, structures with the lowest energy, target function 

Structure Validation

Entry History 

Deposition Data

• Released Date: 2007-10-09 
Deposition Author(s): Kasahara, N., Tsuda, K., Muto, Y., Inoue, M., Kigawa, T., Terada, T., Shirouzu, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

Revision History  

• Version 1.0: 2007-10-09
  Type: Initial release
  
• Version 1.1: 2011-07-13
  Changes: Version format compliance
• Version 1.2: 2022-03-16
  Changes: Data collection, Database references, Derived calculations
• Version 1.3: 2024-05-29
  Changes: Data collection